Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq10175 105 5e-18 >seq10175 Length=5235 Score = 105 bits (116), Expect = 5e-18 Identities = 102/130 (78%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 19001 TCAGTTTTACGT-TGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATA 19059 ||||||||| || ||||| || || ||||| || ||| ||||||| |||||| |||| Sbjct 401 TCAGTTTTATGTATGCAATGGGGGAGTTATCGTGTCAATTATACCAACGATCGGCTGATA 342 Query 19060 TGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGC 19119 |||| ||||| || ||||||||||| || | || || ||||| || ||||| | || | Sbjct 341 TGGGACTTGGAGTTCCGTTCAACATCGCGAGTTACGCGCTTCTCACTTACATGATTGCCC 282 Query 19120 ATGTTACAGG 19129 |||||||||| Sbjct 281 ATGTTACAGG 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397175271333645