Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq10175 82.4 5e-11 >seq10175 Length=5235 Score = 82.4 bits (90), Expect = 5e-11 Identities = 95/127 (75%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 || ||||| ||||||||| |||| | ||| | || || || ||||| || || ||||| Sbjct 275 GTAACATGGGCAATCATGTAAGTGAGAAGCGCGTAACTCGCGATGTTGAACGGAACTCCA 334 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCT-TTCCATCACAGACATA 101871 | ||||||||||| |||| ||| || | |||||| || | || |||| || ||||| Sbjct 335 AGTCCCATATCAGCCGATCGTTGGTATAATTGACACGATAACTCCCCCATTGCATACATA 394 Query 101872 AAATTGA 101878 ||| ||| Sbjct 395 AAACTGA 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359145448805531