Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq70651 105 8e-18 seq51577 105 8e-18 seq78050 82.4 9e-11 >seq70651 Length=516 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 91 TCTCCCCGTCAGGGAATCGAACCCTGGTCGCCCGCGTGACAGGCGGGAATACTCACCACT 32 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 31 ATACTAACGAGGA 19 >seq51577 Length=797 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 676 TCTCCCCGTCAGGGAATCGAACCCTGGTCGCCCGCGTGACAGGCGGGAATACTCACCACT 617 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 616 ATACTAACGAGGA 604 >seq78050 Length=1135 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||| ||||| |||| |||| ||||||| ||| ||||||||||||| Sbjct 735 CTCCCCGCCGGGGAATCTAACCCCGGTCGCCCGAGTGACAGTCGGGAATACTCACCACTA 794 Query 60126 TACTACCGAGGATTG 60140 ||||| |||||| || Sbjct 795 TACTAGCGAGGACTG 809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568398981330680