Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq11070 100 4e-16 >seq11070 Length=7227 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || ||||| || || | || | || || ||||||||||| || |||||||| | Sbjct 4719 ACCTGAAATTCGCCGGATAGAACACGTCGTGTATAAATATTACTTGTGTACGGTTCAATT 4660 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 || || |||||||| | ||| || || ||||||||||||||||| ||||||| || |||| Sbjct 4659 GATTCGTTATTTCCAAGAATCTGTGCGGTTGATGCAGTCGGCATGGGTGCCATCAGTAAA 4600 Query 62508 CTATTTCTAAGACCGTAT 62525 || || | || ||| || Sbjct 4599 CTGTTGCGAACGCCGAAT 4582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626052227605680