Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq11070 105 9e-18 >seq11070 Length=7227 Score = 105 bits (116), Expect = 9e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || |||||||| || || | || | || || ||||||||||| || |||||||| | Sbjct 4719 ACCTGAAATTCGCCGGATAGAACACGTCGTGTATAAATATTACTTGTGTACGGTTCAATT 4660 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 || || |||||||| | ||| || || ||||||||||||||||| ||||||| || |||| Sbjct 4659 GATTCGTTATTTCCAAGAATCTGTGCGGTTGATGCAGTCGGCATGGGTGCCATCAGTAAA 4600 Query 65301 CTATTTCTAAGACCGTAT 65318 || || | || ||| || Sbjct 4599 CTGTTGCGAACGCCGAAT 4582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 654237905688040