Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq20532 87.8 1e-12 >seq20532 Length=1724 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| |||| | || | ||||||||| || || ||||| || ||||||||||| Sbjct 569 CCTCCTCTTAATCGGAGTACAAGATGAAGGGTCGACTCCTTTTGGATATTGTAATCGCTC 628 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | ||| | ||||| | ||| ||||||||| | ||||| ||||||||||| ||| Sbjct 629 AAGGTTCGTCCATCTTCAAGTTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGGA 688 Query 15257 ATTCCT 15262 |||||| Sbjct 689 ATTCCT 694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360068039447421