Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq46785 84.2 4e-11 >seq46785 Length=3947 Score = 84.2 bits (92), Expect = 4e-11 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||||| || || ||||||||||| || | ||||||||| ||||||| || || Sbjct 212 CTTTTCAACGCGATTGAGACGATGCCGTGTGTACGGAAGAAGGCAAACTGGGCCCTGAAG 153 Query 42669 TGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 |||||| | | | | || | | || || || | | || || ||| | | || || Sbjct 152 TGGATC-AACGACAAGAACTCGAGTTTTGGTGAACGAATCGTCGCTTTTGCATCTGTGGA 94 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGA 42786 || ||||||||| || | ||||| | || |||||||| ||| || |||| || | Sbjct 93 AGGGATCTTCTTCAGCGGTTCGTTCGCTGCTATTTTCTGGCTGAAGAAGCGAGGTCTC-A 35 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAG 42820 ||||||| || || | |||||||||| | ||||| Sbjct 34 TGCCCGGCCTAACTTACTCGAACGAATTGATCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 938693456288560