Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq16649 84.2 5e-11 >seq16649 Length=7898 Score = 84.2 bits (92), Expect = 5e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 298325 GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 298384 ||||| |||||||| | ||||| || ||||| ||||| || |||||| | || |||||| Sbjct 7301 GCATCTCGGACATTGAGGAGTTTACCCCGAAGTGGGAAGACGCCATATTTGTCACGACCG 7242 Query 298385 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 298444 ||||| || || || | | || | ||| || ||||| ||||| || | ||||| Sbjct 7241 ACCACTGATAGACCGGATACGGCTAATGTTTTAGCTGAATCTCCCTCAGTTAAGATGAGT 7182 Query 298445 GTGCACATTTTGCTGTTATTCGTTCCAGC-CCATGTAGCATCGTTGAGTTTGGGAATTCC 298503 ||||| | || ||||||||||| ||| ||||||||| | ||| || | ||| Sbjct 7181 GTGCAATGCATCGAATTCTTCGTTCCAGCATCAT-TAGCATCGTCCAATTTCGGCACTCC 7123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1096121578587350