Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq46785 95.1 1e-14 >seq46785 Length=3947 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 126079 GATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAAT 126138 ||| | ||| |||||| | || || ||||||||||| |||||||||| ||||||||| Sbjct 3 GATCAATTCGTTCGAGTAAGTTAGGCCGGGCATGAGACCTCGCTTCTTCAGCCAGAAAAT 62 Query 126139 CGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTC 126198 ||| || ||||| ||||||||| || |||||| | || || || | || || || Sbjct 63 AGCAGCGAACGAACCGCTGAAGAAGATCCCTTCCACAGATGCAAAAGCGACGATTCGTTC 122 Query 126199 AGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTTCATCGCCCACTGCGCCTTTTTCTC 126255 | ||| | | ||| | |||| || | |||||||| ||||| | ||||| ||| Sbjct 123 ACCAA---AACTCGAGTTCTTGTCGTTGATCCACTTCAGGGCCCAGTTTGCCTTCTTCCG 179 Query 126256 GATACACGGGACGGTCTGGATCGC 126279 | |||||| | |||| ||||| Sbjct 180 TACACACGGCATCGTCTCAATCGC 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593782314035480