Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq70651 96.9 4e-15 seq51577 96.9 4e-15 >seq70651 Length=516 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || || | ||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 91 TCTCCCCGTCAGGGAATCGAACCCTGGTCGCCCGCGTGACAGGCGGGAATACTCACCACT 32 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 31 ATACTAACGAGGA 19 >seq51577 Length=797 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || || | ||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 676 TCTCCCCGTCAGGGAATCGAACCCTGGTCGCCCGCGTGACAGGCGGGAATACTCACCACT 617 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 616 ATACTAACGAGGA 604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539965195485040