Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq46785 84.2 2e-11 >seq46785 Length=3947 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 |||| |||||| || || || |||||| ||| || || || || || |||||||||||| Sbjct 1121 ACCAAATTTTCATTCACAATCCCGTCGGAGGCAGCAAAGAAAGCAAGGACGTGCTTGATG 1180 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 || || ||||| || ||||||| |||||||| | |||| || || ||||| ||| Sbjct 1181 AATGTTCGTTCGTTCTCCTTCAAGCCCTCCCAGTGGTTAATGTCATTTGATAGGTCAACC 1240 Query 133399 T 133399 | Sbjct 1241 T 1241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497182510663040