Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq46785 91.5 2e-13 >seq46785 Length=3947 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/155 (74%), Gaps = 6/155 (4%) Strand=Plus/Minus Query 102126 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAG 102182 ||||| || | ||||| |||||||| | | |||| | ||| ||| ||| ||| Sbjct 176 AAGAAGGCAAACTGGGCCCTGAAGTGGATCAACGACAAGAACTCGAGTT---TTGGTGAA 120 Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242 ||| || |||| ||||| | ||| || || ||||||||| ||||| ||| |||||| Sbjct 119 CGAATCGTCGCTTTTGCATCTGTGGAAGGGATCTTCTTCAGCGGTTCGTTCGCTGCTATT 60 Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCT 102277 | ||||| |||||||||||||||||||| || || Sbjct 59 TTCTGGCTGAAGAAGCGAGGTCTCATGCCCGGCCT 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617031283802320