Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq46785 84.2 3e-11 >seq46785 Length=3947 Score = 84.2 bits (92), Expect = 3e-11 Identities = 113/155 (73%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 117327 TAGGCCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAA 117386 |||||| ||||||||||| |||||||||| ||| ||||||| ||| || ||| ||| Sbjct 24 TAGGCCGGGCATGAGACCTCGCTTCTTCAGCCAGAAAATAGCAGCGAACGAACCGCTGAA 83 Query 117387 GAAGATACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT 117446 |||||| || |||||| | ||||| || | | || || | || |||| |||| Sbjct 84 GAAGATCCCTTCCACAGATGCAAAAGCGACGATTCGTTC-ACCAAAACTCGAGTTCTTGT 142 Query 117447 -GTCAAACCATTTCATTGCCCATTTCGCCTTCTTC 117480 || | ||| |||| ||||| || ||||||||| Sbjct 143 CGTTGATCCACTTCAGGGCCCAGTTTGCCTTCTTC 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586453592412440