Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq46785 102 2e-16 >seq46785 Length=3947 Score = 102 bits (112), Expect = 2e-16 Identities = 131/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 25821 GAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCG 25880 || |||||| |||||| |||||||||||||| | ||| | | | ||||| || || Sbjct 177 GAAGAAGGCAAACTGGGCCCTGAAGTGGATCAACGACAAGAACTCGAGTTTTGGTGAACG 118 Query 25881 GCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTT 25940 | || || ||||| ||||||| || ||||| |||||||||||||| || || || || Sbjct 117 AATCGTCGCTTTTGCATCTGTGGAAGGGATCTTCTTCAGCGGTTCGTTCGCTGCTATTTT 58 Query 25941 CTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTT-TTCCAACGAGCTCATCAG 25997 |||||| ||| || || ||||||||| || |||| || ||||| | ||||| Sbjct 57 CTGGCTGAAGAAGCGAGGTCTCATGCCCGGCCT-AACTTACTCGAACGAATTGATCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923291689752640