Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq5824 84.2 3e-11 >seq5824 Length=3014 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/142 (74%), Gaps = 8/142 (6%) Strand=Plus/Plus Query 155793 ATTGTT--TATAATAAAAAT----TTATGTAATAAA--ATGCAAATATTTATTAAAACAT 155844 |||||| |||| |||| || |||| | ||| | ||||| || ||| | || |||| Sbjct 118 ATTGTTATTATATTAAAGATATTTTTATTTTATAGACCATGCAGATTTTTGTGAAGACAT 177 Query 155845 TGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAA 155904 |||||||||| || || ||| | ||||| || | ||| || | ||| |||||| ||| Sbjct 178 TGACTGGAAAGACCATCACACTTGAAGTTGAGGCTTCAGACACAATTGAAAACGTCAAAG 237 Query 155905 ATAAAATACAAGATAAAGAAGG 155926 |||||| ||||| |||||||| Sbjct 238 CTAAAATTCAAGACAAAGAAGG 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 727496494099600