Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq182255 134 4e-26 seq61202 134 4e-26 >seq182255 Length=2025 Score = 134 bits (148), Expect = 4e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 106901 TTTTTCATAGCAAAAGACGAACTCATACCATAGAAAAACTTGAACTTTTTACCATCTTCC 106960 || ||||| ||| || |||||||||||||| || || |||| ||||||||||||| | Sbjct 721 TTCTTCATGGCAGTAGTAGAACTCATACCATAAAACAATTTGACTTTTTTACCATCTTTC 780 Query 106961 TCAATTAACTTACCTGGATTTTCATCGTGTCCCGCAAAGACACCGCCAACCATTACGAAA 107020 |||| || | ||| | || |||||| || ||||| | ||| |||| ||| |||||| Sbjct 781 ACAATCAATTCTCCTCCACATTGATCGTGACCAGCAAAAAGACCACCAATCATGACGAAA 840 Query 107021 TCAGCCCCGCCACCGAATGCTTTAGCCATATCACCAGGGCAAGTAATTCCACCATCACTA 107080 ||||| || | | ||||||||||| | ||| ||||| |||||| ||||||||| | Sbjct 841 TCAGCACCAGCTGCAAATGCTTTAGCAACATCTCCAGGACAAGTACAACCACCATCAGAA 900 Query 107081 ATAATAT 107087 || |||| Sbjct 901 ATTATAT 907 >seq61202 Length=2025 Score = 134 bits (148), Expect = 4e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 106901 TTTTTCATAGCAAAAGACGAACTCATACCATAGAAAAACTTGAACTTTTTACCATCTTCC 106960 || ||||| ||| || |||||||||||||| || || |||| ||||||||||||| | Sbjct 721 TTCTTCATGGCAGTAGTAGAACTCATACCATAAAACAATTTGACTTTTTTACCATCTTTC 780 Query 106961 TCAATTAACTTACCTGGATTTTCATCGTGTCCCGCAAAGACACCGCCAACCATTACGAAA 107020 |||| || | ||| | || |||||| || ||||| | ||| |||| ||| |||||| Sbjct 781 ACAATCAATTCTCCTCCACATTGATCGTGACCAGCAAAAAGACCACCAATCATGACGAAA 840 Query 107021 TCAGCCCCGCCACCGAATGCTTTAGCCATATCACCAGGGCAAGTAATTCCACCATCACTA 107080 ||||| || | | ||||||||||| | ||| ||||| |||||| ||||||||| | Sbjct 841 TCAGCACCAGCTGCAAATGCTTTAGCAACATCTCCAGGACAAGTACAACCACCATCAGAA 900 Query 107081 ATAATAT 107087 || |||| Sbjct 901 ATTATAT 907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1462798338082697