Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq11070 87.8 4e-12 >seq11070 Length=7227 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 113008 TACTGTTGGCACCAATGCCTACAGCTTCGACTGCACAGATTCTCGGTAATAATGAATGTT 113067 ||||| ||||||| ||||| || || || || ||||||||||| || ||||| |||| Sbjct 4602 TACTGATGGCACCCATGCCGACTGCATCAACCGCACAGATTCTTGGAAATAACGAATCAA 4661 Query 113068 TCGAGCCAATTACAAGTAATATTTATGTCCGACGTGTTCTAGCAGGTGAGTTT 113120 | || || ||||||||||||||| |||||||||||| | || || ||| Sbjct 4662 TTGAACCGTACACAAGTAATATTTATACACGACGTGTTCTATCCGGCGAATTT 4714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179540040461041