Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq46785 95.1 1e-14 >seq46785 Length=3947 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/167 (74%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGCGT 94794 |||||| | | ||||| || | ||||| |||||||| | | |||| | ||| || Sbjct 188 CCGTGTGTACGGAAGAAGGCAAACTGGGCCCTGAAGTGGATCAACGACAAGAACTCGAGT 129 Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 | ||| ||| ||| || |||| ||||| | ||| || || ||||||||| ||||| Sbjct 128 T---TTGGTGAACGAATCGTCGCTTTTGCATCTGTGGAAGGGATCTTCTTCAGCGGTTCG 72 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCT 94901 ||| ||||||| ||||| |||||||||||||||||||| || || Sbjct 71 TTCGCTGCTATTTTCTGGCTGAAGAAGCGAGGTCTCATGCCCGGCCT 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579773768016440