Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq182255 206 8e-48 seq61202 206 8e-48 seq30684 149 2e-30 seq228302 143 8e-29 seq51213 131 5e-25 seq178845 122 3e-22 seq46392 122 3e-22 seq177247 118 3e-21 seq175707 118 3e-21 seq56399 118 3e-21 seq47169 118 3e-21 seq106878 109 2e-18 seq20532 107 6e-18 seq5841 98.7 3e-15 seq5824 98.7 3e-15 seq131350 93.3 1e-13 >seq182255 Length=2025 Score = 206 bits (228), Expect = 8e-48 Identities = 253/343 (74%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 130661 CATACCATAGAACACTTTATAATTTTCACCATTTTCTTCAACAACTTCCCCAGCACATTC 130720 ||||||||| |||| ||| |||| ||||| || ||| | ||| || |||||| Sbjct 744 CATACCATAAAACAATTTGACTTTTTTACCATCTTTCACAATCAATTCTCCTCCACATTG 803 Query 130721 ATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTT 130780 ||| || |||| || | || |||| ||| || |||||||| || ||| |||||||||| Sbjct 804 ATCGTGACCAGCAAAAAGACCACCAATCATGACGAAATCAGCACCAGCTGCAAATGCTTT 863 Query 130781 CGCAATATCCCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATG 130840 |||| ||| || ||| | ||||||| ||||||| ||| | ||||||| | ||||| Sbjct 864 AGCAACATCTCCAGGACAAGTACAACCACCATCAGAAATTATATGTCCACCAAGACCATG 923 Query 130841 TGCCGCATCAGCACACTCTGAAATAGCAG-AAAGTTGTGGATATCCAACTCCAGTTACTT 130899 || ||||||||||| || |||| ||| |||||||| || ||||| ||||| | Sbjct 924 GGCTGCATCAGCACATTCAAGAATA-CAGCTGAGTTGTGGGTAACCAACACCAGTCTTCT 982 Query 130900 TTCTTGTAGTACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCCTGCTA 130959 | | || || ||||| | |||||||||||||||| |||||||| |||||||| | | Sbjct 983 TACGAGTTGTGCAAACGGATCCTGGACCAATACCAACCTTAACAATGTCAGCTCCAGACA 1042 Query 130960 AAATTAGTGCTTCGGTCATTTCTCTAGTAGCCACATTACCTGC 131002 |||| | |||| ||||| ||| |||| | |||||||| || Sbjct 1043 TGATTAATTCTTCCGTCATATCTGTAGTGGAGACATTACCAGC 1085 >seq61202 Length=2025 Score = 206 bits (228), Expect = 8e-48 Identities = 253/343 (74%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 130661 CATACCATAGAACACTTTATAATTTTCACCATTTTCTTCAACAACTTCCCCAGCACATTC 130720 ||||||||| |||| ||| |||| ||||| || ||| | ||| || |||||| Sbjct 744 CATACCATAAAACAATTTGACTTTTTTACCATCTTTCACAATCAATTCTCCTCCACATTG 803 Query 130721 ATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTT 130780 ||| || |||| || | || |||| ||| || |||||||| || ||| |||||||||| Sbjct 804 ATCGTGACCAGCAAAAAGACCACCAATCATGACGAAATCAGCACCAGCTGCAAATGCTTT 863 Query 130781 CGCAATATCCCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATG 130840 |||| ||| || ||| | ||||||| ||||||| ||| | ||||||| | ||||| Sbjct 864 AGCAACATCTCCAGGACAAGTACAACCACCATCAGAAATTATATGTCCACCAAGACCATG 923 Query 130841 TGCCGCATCAGCACACTCTGAAATAGCAG-AAAGTTGTGGATATCCAACTCCAGTTACTT 130899 || ||||||||||| || |||| ||| |||||||| || ||||| ||||| | Sbjct 924 GGCTGCATCAGCACATTCAAGAATA-CAGCTGAGTTGTGGGTAACCAACACCAGTCTTCT 982 Query 130900 TTCTTGTAGTACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCCTGCTA 130959 | | || || ||||| | |||||||||||||||| |||||||| |||||||| | | Sbjct 983 TACGAGTTGTGCAAACGGATCCTGGACCAATACCAACCTTAACAATGTCAGCTCCAGACA 1042 Query 130960 AAATTAGTGCTTCGGTCATTTCTCTAGTAGCCACATTACCTGC 131002 |||| | |||| ||||| ||| |||| | |||||||| || Sbjct 1043 TGATTAATTCTTCCGTCATATCTGTAGTGGAGACATTACCAGC 1085 >seq30684 Length=2398 Score = 149 bits (164), Expect = 2e-30 Identities = 198/274 (72%), Gaps = 1/274 (0%) Strand=Plus/Minus Query 349515 AACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAA 349574 ||| |||||| ||||| || ||||||||| ||||||||||| | | |||||| |||| Sbjct 1425 AACCAAAACA-TTTTTCCCAGAAGAAATTAGTTCAATGGTTTTGTTGAGAATGAAAGAAA 1367 Query 349575 TTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATT 349634 |||||||| ||| | || |||| || || || || || | ||||| ||||| |||| Sbjct 1366 CCGCTGAAGCCTATCTTGGCAAAACTGTGACCGACGCCGTCGTCACTGTTCCAGCTTATT 1307 Query 349635 TTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTC 349694 | || ||| | || ||| || || || |||||||| | ||| | || || ||||||| Sbjct 1306 TCAACGATTCTCAACGTCAAGCTACCAAGGATGCTGGAACCATCTCCGGTTTGAATGTTC 1247 Query 349695 TAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTG 349754 | | || ||||||||||| |||||||| || ||||| || || | || || | || Sbjct 1246 TCCGTATCATTAATGAACCGACTGCTGCTGCCATTGCTTACGGTTTGGACAAGAAAGTTG 1187 Query 349755 ACCAAGaaaaaaaTATTCTTATTTTTGATTTAGG 349788 |||| || || || | ||||| ||||| || Sbjct 1186 GTGAAGAGAAGAACGTTTTGATTTTCGATTTGGG 1153 >seq228302 Length=411 Score = 143 bits (158), Expect = 8e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||||||| |||||| |||| | ||||||||||||| ||||||| | ||| | Sbjct 79 CCTGAAGAAATTAGTTCAATGATTTTGATGAAAATGAAGGAAACTGCTGAATCTTATCTC 138 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | ||| || | || |||||| ||||||| ||||| ||||| |||||| |||| || Sbjct 139 GGAGCAACTGTGTCCGACGCTGTTGTTACTGTGCCAGCTTATTTCAATGATTCCCAACGG 198 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || |||||||| | ||| || ||||||||||| | || ||||| || Sbjct 199 CAAGCCACCAAGGATGCTGGAACCATCAGTGGCTTAAATGTTCTTCGTATCATTAACGAG 258 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 |||||||| || || || || ||||| | || |||| Sbjct 259 CCCACTGCCGCTGCTATCGCCTATGGTTTGGACAAAA 295 >seq51213 Length=3572 Score = 131 bits (144), Expect = 5e-25 Identities = 141/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 349551 TGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATG 349610 ||||| || | ||||||||||||| ||||||||||| | ||| ||| || ||||||| Sbjct 1391 TGGTTCTACTGAAAATGAAGGAAACAGCTGAAGCATACCTCGGTAAAAGTGTGACTGATG 1450 Query 349611 CTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTG 349670 ||||| | || |||||||| || || || ||| | || || || || |||||||||| Sbjct 1451 CTGTTGTGACCGTACCAGCTTACTTCAACGATTCGCAACGACAAGCTACCAAAGATGCTG 1510 Query 349671 GCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTG 349730 ||| ||| || || |||||||| | || || || ||||| ||||| || || |||| Sbjct 1511 GCACCATCAGTGGCTTGAATGTTCTTCGGATCATCAACGAACCAACTGCAGCTGCTATTG 1570 Query 349731 CATATGG 349737 | ||||| Sbjct 1571 CGTATGG 1577 >seq178845 Length=945 Score = 122 bits (134), Expect = 3e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 349547 TCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACT 349606 || ||||||||| | ||||| ||||||| || | ||| | | ||||||| | | Sbjct 575 TCTATGGTTTTATACAGGATGAAACAAATTGCAGAGACGTATCTCAATAAAACAGTTAAT 516 Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 |||||||| || ||| |||||||||||||||||| | || ||| || || |||||| Sbjct 515 GATGCTGTGATCACTACCCCAGCCTATTTTAATGATTCACAACGTCAAGCTACCAAAGAT 456 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 ||||| | || || || ||||| ||||| |||| | ||||| || || ||||| || Sbjct 455 GCTGGAACAATCGCTGGTTTAAACGTTCTCCGAATCGTGAATGAGCCTACAGCTGCTGCT 396 Query 349727 ATTGCATATGGG 349738 || ||||||||| Sbjct 395 ATAGCATATGGG 384 >seq46392 Length=5330 Score = 122 bits (134), Expect = 3e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 349547 TCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACT 349606 || ||||||||| | ||||| ||||||| || | ||| | | ||||||| | | Sbjct 371 TCTATGGTTTTATACAGGATGAAACAAATTGCAGAGACGTATCTCAATAAAACAGTTAAT 430 Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 |||||||| || ||| |||||||||||||||||| | || ||| || || |||||| Sbjct 431 GATGCTGTGATCACTACCCCAGCCTATTTTAATGATTCACAACGTCAAGCTACCAAAGAT 490 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 ||||| | || || || ||||| ||||| |||| | ||||| || || ||||| || Sbjct 491 GCTGGAACAATCGCTGGTTTAAACGTTCTCCGAATCGTGAATGAGCCTACAGCTGCTGCT 550 Query 349727 ATTGCATATGGG 349738 || ||||||||| Sbjct 551 ATAGCATATGGG 562 Score = 114 bits (126), Expect = 4e-20 Identities = 222/324 (69%), Gaps = 14/324 (4%) Strand=Plus/Plus Query 350174 CAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTA 350233 ||||||||||| | ||| | || |||||||| | || ||||| ||||||||||| ||| Sbjct 3560 CAGATTGATGAGATTGTTCTTGTGGGTGGTTCAAGTCGCATTCCCAAAGTTCAACAATTA 3619 Query 350234 CTATCTGAGTTTTTTAATGGCAAAG----AACCTTCTAGATCAATTAATCCAGATGAAGC 350289 || | || || | ||||| | ||| | |||| ||||| |||||||| Sbjct 3620 CTCAAAAATTTCTTCGACAACAAAGCGCTTAACTTTTCGATC----AATCCCGATGAAGC 3675 Query 350290 TGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAAT 350349 | | || || || || ||||| || || | |||||||||| ||| ||| | | Sbjct 3676 TATCGCTTACGGCGCGGCTGTGCAAGCTGCAGTTTTATCTGGTGTCAAG---TCTCATGT 3732 Query 350350 TGATGA-TC--TATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGG 350406 || ||| || | | ||||||||||| ||||||||||| || ||| | || || |||| Sbjct 3733 TGTTGAGTCGGTCCTTCTACTAGATGTCACTCCACTTTCTCTAGGAATTGAGACGGCTGG 3792 Query 350407 TGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAAC 350466 | || ||||| || | ||||||| ||| || || | || || | | | || | || Sbjct 3793 AGGCGTCATGACCGTATTAATTCCTAAAAACAGCACGATTCCAACCAGAGAATCTCGAAT 3852 Query 350467 TTTTTCTACATTTGCAGATAATCA 350490 |||| | || | | |||| ||||| Sbjct 3853 TTTTACCACGTATTCAGACAATCA 3876 >seq177247 Length=926 Score = 118 bits (130), Expect = 3e-21 Identities = 159/220 (72%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 349518 AAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTG 349577 ||||| ||| || || || ||||| || ||||| ||| | | ||||||||| | | Sbjct 281 AAAAATCATTCTTCCCTGAGGAAATCAGCTCCATGGTCTTATTAAGAATGAAGGAGACTT 222 Query 349578 CTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTA 349637 |||||||||| | | |||| || ||||| || ||| | ||||| ||||| ||||| | Sbjct 221 CTGAAGCATACCTTGCA-AAACTGTGACTGACGCAGTTGTAACTGTGCCAGCTTATTTCA 163 Query 349638 ATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAA 349697 | || | || ||| || || ||||||||||| | |||||| || || || || | | Sbjct 162 ACGACTCACAACGTCAAGCTACCAAAGATGCTGGTACCATTGCTGGCTTGAACGTCTTGA 103 Query 349698 GAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 |||| || || ||||| || || || || ||||| ||||| Sbjct 102 GAATTATCAACGAACCTACCGCAGCCGCTATTGCTTATGG 63 >seq175707 Length=3075 Score = 118 bits (130), Expect = 3e-21 Identities = 161/224 (72%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 349527 TTTTACCC--GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGC 349584 ||| |||| ||||| || || ||| |||| | ||||||||||| | ||||| || Sbjct 140 TTTCACCCCGGAAGAGATCAGCTCCATGATTTTGTTGAAAATGAAGGAGACGGCTGAGGC 199 Query 349585 ATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGC 349644 |||| | || |||| || ||||||||||| || ||||| || || | ||| |||||| | Sbjct 200 ATATCTTGGAAAAACTGTTACTGATGCTGTCATCACTGTTCCGGCTTGTTTCAATGATTC 259 Query 349645 CCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGAT 349704 || ||| || || || || || || | ||| | || | || ||||| |||| || Sbjct 260 TCAACGTCAGGCCACTAAGGACGCGGGTACAATTTCCGGTATGAACGTTCTCCGAATCAT 319 Query 349705 TAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 || ||||| || ||||| || ||||| || || ||||| |||| Sbjct 320 CAACGAACCGACAGCTGCCGCTATTGCCTACGGACTTGACAAAA 363 >seq56399 Length=3075 Score = 118 bits (130), Expect = 3e-21 Identities = 161/224 (72%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 349527 TTTTACCC--GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGC 349584 ||| |||| ||||| || || ||| |||| | ||||||||||| | ||||| || Sbjct 140 TTTCACCCCGGAAGAGATCAGCTCCATGATTTTGTTGAAAATGAAGGAGACGGCTGAGGC 199 Query 349585 ATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGC 349644 |||| | || |||| || ||||||||||| || ||||| || || | ||| |||||| | Sbjct 200 ATATCTTGGAAAAACTGTTACTGATGCTGTCATCACTGTTCCGGCTTGTTTCAATGATTC 259 Query 349645 CCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGAT 349704 || ||| || || || || || || | ||| | || | || ||||| |||| || Sbjct 260 TCAACGTCAGGCCACTAAGGACGCGGGTACAATTTCCGGTATGAACGTTCTCCGAATCAT 319 Query 349705 TAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 || ||||| || ||||| || ||||| || || ||||| |||| Sbjct 320 CAACGAACCGACAGCTGCCGCTATTGCCTACGGACTTGACAAAA 363 >seq47169 Length=4500 Score = 118 bits (130), Expect = 3e-21 Identities = 159/220 (72%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 349518 AAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTG 349577 ||||| ||| || || || ||||| || ||||| ||| | | ||||||||| | | Sbjct 1905 AAAAATCATTCTTCCCTGAGGAAATCAGCTCCATGGTCTTATTAAGAATGAAGGAGACTT 1964 Query 349578 CTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTA 349637 |||||||||| | | |||| || ||||| || ||| | ||||| ||||| ||||| | Sbjct 1965 CTGAAGCATACCTTGCA-AAACTGTGACTGACGCAGTTGTAACTGTGCCAGCTTATTTCA 2023 Query 349638 ATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAA 349697 | || | || ||| || || ||||||||||| | |||||| || || || || | | Sbjct 2024 ACGACTCACAACGTCAAGCTACCAAAGATGCTGGTACCATTGCTGGCTTGAACGTCTTGA 2083 Query 349698 GAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 |||| || || ||||| || || || || ||||| ||||| Sbjct 2084 GAATTATCAACGAACCTACCGCAGCCGCTATTGCTTATGG 2123 >seq106878 Length=786 Score = 109 bits (120), Expect = 2e-18 Identities = 152/210 (72%), Gaps = 10/210 (5%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| ||| ||||||| ||||| ||||| || ||| |||| || ||||| ||||||| Sbjct 202 ATGCAGTTGTTACTGTTCCAGCTTATTTCAACGATTCCCAACGCCAGGCAACCAAAGATG 143 Query 349668 CTGG-CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 |||| ||| ||| | || | || || | | | || ||||||||||| || || || Sbjct 142 CTGGTCAG-ATTTCTGGTCTTAACGTCTTGCGTGTAATCAATGAACCCACAGCCGCTGCC 84 Query 349727 ATTGCATATGGGCTTGATAAAA-TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTT 349785 |||| ||||| || || |||| |||| || |||| ||| | | | |||||| Sbjct 83 CTTGCCTATGGCCTCGACAAAACTGAG-------GACAAAATCATTGCTGTCTATGATTT 31 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACT 349815 ||||||||| || ||||||||||| || || Sbjct 30 AGGTGGTGGAACCTTTGATGTATCCCTTCT 1 >seq20532 Length=1724 Score = 107 bits (118), Expect = 6e-18 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||| || | ||||| || ||||||||||| || ||||| ||||| ||||| ||||| Sbjct 568 ACCTCCTCTTAATCGGAGTACAAGATGAAGGGTCGACTCCTTTTGGATATTGTAATCGCT 627 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || ||||| |||||||||||||| || ||||| ||||| | ||||| || || || || Sbjct 628 CAAGGTTCGTCCATCTTCAAGTTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCTGGGGG 687 Query 140630 AATTCCT 140636 ||||||| Sbjct 688 AATTCCT 694 >seq5841 Length=977 Score = 98.7 bits (108), Expect = 3e-15 Identities = 183/261 (70%), Gaps = 12/261 (5%) Strand=Plus/Minus Query 350174 CAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTA 350233 ||||| |||||| | || | ||||| ||||| || || ||||| ||||||||||| | Sbjct 294 CAGATCGATGAAATTGTACTTGTTGGAGGTTCCACTCGCATTCCTAAAGTTCAACAACTG 235 Query 350234 CTATCTGAGTTT-TTTAATGGCAAAGAACCTTCTAGA--TCAATTAATCCAGATGAAGCT 350290 || || |||||| || || || ||||| || | | ||||| ||||| || || || Sbjct 234 CT-TCAGAGTTTCTTCAACGGAAAAGA--GTTGAACAAGTCAATCAATCCTGACGAGGCA 178 Query 350291 GTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAA--AA 350348 || || |||||||||||||| || | || ||||| |||| | | ||| | || Sbjct 177 GTCGCTTATGGTGCTGCTGTACAAGGCGCTGTTTTAACTGGGGACCA---ATCTGAGGAA 121 Query 350349 TTG-ATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGT 350407 || | ||| || || || |||||| |||||||| | ||||| | ||||| ||| Sbjct 120 GTGCAAAGTCTCTTGCTTCTTGATGTAGCTCCACTTACTCTTGGTCTTGAAACGGTGGGT 61 Query 350408 GAAGTAATGACTGTTCTTATT 350428 | || |||||| ||| ||| Sbjct 60 GGTGTGATGACTTCTCTGATT 40 >seq5824 Length=3014 Score = 98.7 bits (108), Expect = 3e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 |||||||| || |||||||||||||| || || ||||| | || || | ||||||||| Sbjct 259 CCTTCTTTGTCTTGAATTTTAGCTTTGACGTTTTCAATTGTGTCTGAAGCCTCAACTTCA 200 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | |||||||| || | ||| || |||||||||||||| Sbjct 199 AGTGTGATGGTCTTTCCAGTCAATGTCTTCACAAAAATCTGCAT 156 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | |||||||||||||||||||| || || | Sbjct 562 TTTGCATACCACCACGAAGACGGAGTACTAAGTGAAGAGTAGACTCTTTTTGGATGTTGT 503 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGAT 140608 | ||| ||| || || |||||||| | ||| |||||||||||||| Sbjct 502 AGTCACTTAACGTGCGTCCATCTTCCAATTGCTTTCCAGCAAAGAT 457 >seq131350 Length=643 Score = 93.3 bits (102), Expect = 1e-13 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 349527 TTTTACCCG-AAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585 ||||| ||| ||||||| || ||||| | || ||||| || ||||| ||||| Sbjct 230 TTTTATCCGGAAGAAATAAGCTCGATGGTACTTTCAAACATGAAAGATATTGCGGAAGCC 289 Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645 ||| | || | ||| ||||||| || || || || ||||| ||||| ||| || Sbjct 290 TATCTTGGCGTTGAAGTTTCTGATGCAGTGATCACCGTTCCAGCTTATTTCTCAGATTCC 349 Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705 || || |||| ||||||||| ||||| || || |||| | | ||| || Sbjct 350 CAACGACAATCAACTCGAGATGCTGGTTCTATTGCAGGTCTACATGTGGTGAAAATTATC 409 Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGA 349755 ||||||||||| || || || ||||| ||||| ||||| ||||| |||| Sbjct 410 AATGAACCCACGGCAGCCGCGATTGCTTATGGTCTTGA-CAAATGTGTGA 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1505968958444643