Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpa_20thompsoni_20[genbank_20GCA_5F001749815.1_202016-09-29] 478,281 sequences; 318,747,957 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq10175 84.2 2e-11 >seq10175 Length=5235 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||| || |||||||| ||||| || |||||||| || ||||||||||| || || | Sbjct 278 ACATGGGCAATCATGTAAGTGAGAAGCGCGTAACTCGCGATGTTGAACGGAACTCCAAGT 337 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCC 6720 ||||| || |||||||||| || | || || || | |||||| Sbjct 338 CCCATATCAGCCGATCGTTGGTATAATTGACACGATAACTCCCC 381 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 |||||| | || || || | || |||||||||| || ||||| | || || |||||| Sbjct 381 GGGGAGTTATCGTGTCAATTATACCAACGATCGGCTGATATGGGACTTGGAGTTCCGTTC 322 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 ||||| || |||||||| || ||||| |||||||| || ||||| Sbjct 321 AACATCGCGAGTTACGCGCTTCTCACTTACATGATTGCCCATGT 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445582457638320