Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq61479 109 6e-19 seq8514 109 6e-19 >seq61479 Length=12598 Score = 109 bits (120), Expect = 6e-19 Identities = 171/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| || || ||| || ||||| || ||||| || || || || | ||| || |||| Sbjct 7118 TTTGATATTCCGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTCAAGAGAGATGTTTT 7059 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 ||||||||||||| || ||| | | ||| || || |||||| ||||| | | | Sbjct 7058 CCATAAAATCAAAAGGGTTAACGGTTCCAAAGATTTTGCTGTACCCAAGTTCTATCATGA 6999 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACAT-TAAGTCGCAATTAATTCCTATAAGT 16090 ||||| || |||||||| || || | |||||| | || | ||| ||||| |||||| Sbjct 6998 GCCTATCAGCAACAAATTCAATGTAATCACACATATCCTTCAC-ATTCATTCCAATAAGT 6940 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || |||||||||| | ||||||| | ||| | ||||||| ||||| || || Sbjct 6939 TTAACAGGAAGAGCTTCACTGAAAAATTCCTTTTCAACATCAACCGCATCTTTGATCATT 6880 Query 16151 TC 16152 || Sbjct 6879 TC 6878 >seq8514 Length=8580 Score = 109 bits (120), Expect = 6e-19 Identities = 171/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| || || ||| || ||||| || ||||| || || || || | ||| || |||| Sbjct 5697 TTTGATATTCCGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTCAAGAGAGATGTTTT 5756 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 ||||||||||||| || ||| | | ||| || || |||||| ||||| | | | Sbjct 5757 CCATAAAATCAAAAGGGTTAACGGTTCCAAAGATTTTGCTGTACCCAAGTTCTATCATGA 5816 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACAT-TAAGTCGCAATTAATTCCTATAAGT 16090 ||||| || |||||||| || || | |||||| | || | ||| ||||| |||||| Sbjct 5817 GCCTATCAGCAACAAATTCAATGTAATCACACATATCCTTCAC-ATTCATTCCAATAAGT 5875 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || |||||||||| | ||||||| | ||| | ||||||| ||||| || || Sbjct 5876 TTAACAGGAAGAGCTTCACTGAAAAATTCCTTTTCAACATCAACCGCATCTTTGATCATT 5935 Query 16151 TC 16152 || Sbjct 5936 TC 5937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510961069490480