Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq43997 95.1 1e-14 >seq43997 Length=5328 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| || ||| | || ||||| ||||| ||||||||||| ||||| || || || Sbjct 5201 GATAAGGAGGGTATTCCTCCTGATCAGCAAAGGCTTATCTTTGCTGGCAAGCAGCTCGAG 5142 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | |||| || |||||||||||||||||| ||||| ||| | || |||| ||| Sbjct 5141 GATGGAAGAACTTTGAGCGATTACAATATTCAGAAAGAATCAACTTTGCATCTGGTATTA 5082 Query 29175 CGATT 29179 ||||| Sbjct 5081 CGATT 5077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427965804454670