Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq43997 86.0 5e-12 >seq43997 Length=5328 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||| || ||| | || ||||| ||||| ||||||||||| ||||| || | || Sbjct 5201 GATAAGGAGGGTATTCCTCCTGATCAGCAAAGGCTTATCTTTGCTGGCAAGCAGCTCGAG 5142 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | |||| || ||||||||||||||| || ||||| ||| | || |||| ||| Sbjct 5141 GATGGAAGAACTTTGAGCGATTACAATATTCAGAAAGAATCAACTTTGCATCTGGTATTA 5082 Query 25248 CGATT 25252 ||||| Sbjct 5081 CGATT 5077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410441762960396