Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq33280 86.0 6e-12 >seq33280 Length=5083 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || |||||| | || || ||||||||||| | ||||| ||| | | Sbjct 177 ATGCAAATTTTTGTTAAAACGTTAACCGGAAAAACCATCACTCTTGACGTTGAATCATCT 118 Query 40750 GACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || ||||| | || |||||||| ||||| ||||| || || | || || Sbjct 117 GACACCATTGAAAACG-TGAAAACAAAAATTCAGGACAAGGAGGGAATTCCTCCTGATCA 59 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGA 40844 ||| |||| || | ||| || |||||||| || || Sbjct 58 GCAGAGACTTATTTTCGCTGGAAAACAGCTTGAGGA 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514762496820640