Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq54562 248 8e-61 seq39983 248 8e-61 seq34305 248 8e-61 seq31035 248 8e-61 seq31034 248 8e-61 seq61479 100 3e-16 seq8514 100 3e-16 >seq54562 Length=4898 Score = 248 bits (274), Expect = 8e-61 Identities = 519/766 (68%), Gaps = 13/766 (2%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||| | || ||||||| ||| | | | ||||| | |||||| | |||||| Sbjct 2307 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2366 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATG--TAGGAT 36907 || || ||| |||| ||| ||| |||||||| |||| ||| |||| | || | Sbjct 2367 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGT--TATGCTTCGGTT 2424 Query 36908 TATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCA 36967 | | | | || ||| || ||||||||||| ||| ||| | | | ||| || | || Sbjct 2425 CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACA 2484 Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 | || | |||| | | ||||| ||||| |||||||| | |||||||| | Sbjct 2485 TATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTT 2544 Query 37028 CTGGTAAATCTAA---ATGTT--GAATAGAACCATTATGTAACAC-AATTGTATTCTTTA 37081 || ||||| | ||||| ||| || ||||| | || || || | ||| | | Sbjct 2545 GAGG--AATCTCAGCAATGTTTTGAACCGATCCATTGT-TAGCAATAAGTTGATTTCTCA 2601 Query 37082 TGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCT 37141 |||||| |||||| |||||| | | || | || ||||| || ||| ||| ||||||| Sbjct 2602 TGTCATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCT 2661 Query 37142 GAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201 ||||||| |||| |||||||| ||| | ||||||||| |||| || |||||||| || | Sbjct 2662 GAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATT 2721 Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261 ||||||| | | |||||||| || || ||||||||||| | || || | |||| Sbjct 2722 CATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTAT 2781 Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321 ||| |||||| ||| | || | | | | ||||| || |||||||||||| | || | Sbjct 2782 TTCGCAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAG 2841 Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381 | | ||| | |||| | || | || ||||| || |||||| | | || Sbjct 2842 GAGTAACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAAC 2901 Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441 | ||||| | || || | || ||||| | || ||| | || ||||||||| Sbjct 2902 TTTCATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATA 2961 Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501 | |||||||| || | ||||| | | || ||||||| | ||| || || | || | || Sbjct 2962 TAGTTTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCA 3021 Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547 | | ||| |||| |||||||| || || ||||| || || || Sbjct 3022 TCAGAAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGG 3067 Score = 154 bits (170), Expect = 1e-32 Identities = 341/502 (68%), Gaps = 12/502 (2%) Strand=Plus/Plus Query 37907 TTTTCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATA 37966 |||||| | ||||||| || || || | | | ||| || | ||||| | || | || Sbjct 3562 TTTTCTGTTTTTCGTACTCAATGTAAAGATCCTCAAATTCTTGACCCCAAGCGTCACTTA 3621 Query 37967 ATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCA 38026 |||| |||| | ||| ||||||| ||||| || ||||| ||| || | || || Sbjct 3622 ATCCACGACAATGATTTGGGCACATTAAGGACCAATCCTCATCGGCTTCAACTCTTTTCA 3681 Query 38027 TAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT-TCTTCGTTC 38085 |||||||||||| | ||| || || ||| || ||| | | ||| ||| ||||| || Sbjct 3682 TAAATAAATCAGAAATCCACAAGGCGTAAAACAAGTCTCTAGCTCT-TATCTCTTCATTT 3740 Query 38086 CCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || ||||| |||||| |||| || ||| | || ||||| || |||||||| || | ||| Sbjct 3741 CCCACATTTTTTCTT-AGCTCTAAAAATGCAAAAATATCCGCATGCCATGGCTCAAGATA 3799 Query 38145 AATCGACATTGCT-CCTGGTCTTTTATCACCTCCCTGATTAATATATC---TAACTGTGT 38200 ||| | || ||| ||||| | |||| || ||||||| || |||| ||| | Sbjct 3800 AATAG-CAAAGCTACCTGGGCGCTTATTTCCACCCTGATCAACGTATCGCGAAAC---AT 3855 Query 38201 TATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATAT 38260 ||||| | | ||||||| || || | || || || || |||| | |||| Sbjct 3856 TATTAAAGACCCTTAACAATGGAACAAGGCCGTTCGAAAAACCACAAGTACCCGCAATAT 3915 Query 38261 AAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATA 38320 | | || ||| || |||||| | |||||| ||||| || || ||||| |||| Sbjct 3916 ACGAGCCAGAAGCCCGAATATTATGAAGATGCAATCCAATTCCTCCAGCGTGTTTCGATA 3975 Query 38321 TTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380 | | ||| |||| || | || |||||||| || || || |||||||| || || | | Sbjct 3976 TCATAGCACATTCCTTAACAGTGTCAAATATGCCCTCAATGCTGTCATCTTTCATAGCAA 4035 Query 38381 GTATAAAACAACTAGACATTTG 38402 | |||||||| | || ||| Sbjct 4036 TCAAGAAACAACTTGCCAATTG 4057 >seq39983 Length=4877 Score = 248 bits (274), Expect = 8e-61 Identities = 519/766 (68%), Gaps = 13/766 (2%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||| | || ||||||| ||| | | | ||||| | |||||| | |||||| Sbjct 2286 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2345 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATG--TAGGAT 36907 || || ||| |||| ||| ||| |||||||| |||| ||| |||| | || | Sbjct 2346 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGT--TATGCTTCGGTT 2403 Query 36908 TATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCA 36967 | | | | || ||| || ||||||||||| ||| ||| | | | ||| || | || Sbjct 2404 CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACA 2463 Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 | || | |||| | | ||||| ||||| |||||||| | |||||||| | Sbjct 2464 TATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTT 2523 Query 37028 CTGGTAAATCTAA---ATGTT--GAATAGAACCATTATGTAACAC-AATTGTATTCTTTA 37081 || ||||| | ||||| ||| || ||||| | || || || | ||| | | Sbjct 2524 GAGG--AATCTCAGCAATGTTTTGAACCGATCCATTGT-TAGCAATAAGTTGATTTCTCA 2580 Query 37082 TGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCT 37141 |||||| |||||| |||||| | | || | || ||||| || ||| ||| ||||||| Sbjct 2581 TGTCATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCT 2640 Query 37142 GAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201 ||||||| |||| |||||||| ||| | ||||||||| |||| || |||||||| || | Sbjct 2641 GAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATT 2700 Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261 ||||||| | | |||||||| || || ||||||||||| | || || | |||| Sbjct 2701 CATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTAT 2760 Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321 ||| |||||| ||| | || | | | | ||||| || |||||||||||| | || | Sbjct 2761 TTCGCAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAG 2820 Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381 | | ||| | |||| | || | || ||||| || |||||| | | || Sbjct 2821 GAGTAACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAAC 2880 Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441 | ||||| | || || | || ||||| | || ||| | || ||||||||| Sbjct 2881 TTTCATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATA 2940 Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501 | |||||||| || | ||||| | | || ||||||| | ||| || || | || | || Sbjct 2941 TAGTTTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCA 3000 Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547 | | ||| |||| |||||||| || || ||||| || || || Sbjct 3001 TCAGAAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGG 3046 Score = 154 bits (170), Expect = 1e-32 Identities = 341/502 (68%), Gaps = 12/502 (2%) Strand=Plus/Plus Query 37907 TTTTCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATA 37966 |||||| | ||||||| || || || | | | ||| || | ||||| | || | || Sbjct 3541 TTTTCTGTTTTTCGTACTCAATGTAAAGATCCTCAAATTCTTGACCCCAAGCGTCACTTA 3600 Query 37967 ATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCA 38026 |||| |||| | ||| ||||||| ||||| || ||||| ||| || | || || Sbjct 3601 ATCCACGACAATGATTTGGGCACATTAAGGACCAATCCTCATCGGCTTCAACTCTTTTCA 3660 Query 38027 TAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT-TCTTCGTTC 38085 |||||||||||| | ||| || || ||| || ||| | | ||| ||| ||||| || Sbjct 3661 TAAATAAATCAGAAATCCACAAGGCGTAAAACAAGTCTCTAGCTCT-TATCTCTTCATTT 3719 Query 38086 CCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || ||||| |||||| |||| || ||| | || ||||| || |||||||| || | ||| Sbjct 3720 CCCACATTTTTTCTT-AGCTCTAAAAATGCAAAAATATCCGCATGCCATGGCTCAAGATA 3778 Query 38145 AATCGACATTGCT-CCTGGTCTTTTATCACCTCCCTGATTAATATATC---TAACTGTGT 38200 ||| | || ||| ||||| | |||| || ||||||| || |||| ||| | Sbjct 3779 AATAG-CAAAGCTACCTGGGCGCTTATTTCCACCCTGATCAACGTATCGCGAAAC---AT 3834 Query 38201 TATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATAT 38260 ||||| | | ||||||| || || | || || || || |||| | |||| Sbjct 3835 TATTAAAGACCCTTAACAATGGAACAAGGCCGTTCGAAAAACCACAAGTACCCGCAATAT 3894 Query 38261 AAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATA 38320 | | || ||| || |||||| | |||||| ||||| || || ||||| |||| Sbjct 3895 ACGAGCCAGAAGCCCGAATATTATGAAGATGCAATCCAATTCCTCCAGCGTGTTTCGATA 3954 Query 38321 TTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380 | | ||| |||| || | || |||||||| || || || |||||||| || || | | Sbjct 3955 TCATAGCACATTCCTTAACAGTGTCAAATATGCCCTCAATGCTGTCATCTTTCATAGCAA 4014 Query 38381 GTATAAAACAACTAGACATTTG 38402 | |||||||| | || ||| Sbjct 4015 TCAAGAAACAACTTGCCAATTG 4036 >seq34305 Length=4887 Score = 248 bits (274), Expect = 8e-61 Identities = 519/766 (68%), Gaps = 13/766 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||| | || ||||||| ||| | | | ||||| | |||||| | |||||| Sbjct 2666 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2607 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATG--TAGGAT 36907 || || ||| |||| ||| ||| |||||||| |||| ||| |||| | || | Sbjct 2606 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGT--TATGCTTCGGTT 2549 Query 36908 TATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCA 36967 | | | | || ||| || ||||||||||| ||| ||| | | | ||| || | || Sbjct 2548 CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACA 2489 Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 | || | |||| | | ||||| ||||| |||||||| | |||||||| | Sbjct 2488 TATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTT 2429 Query 37028 CTGGTAAATCTAA---ATGTT--GAATAGAACCATTATGTAACAC-AATTGTATTCTTTA 37081 || ||||| | ||||| ||| || ||||| | || || || | ||| | | Sbjct 2428 GAGG--AATCTCAGCAATGTTTTGAACCGATCCATTGT-TAGCAATAAGTTGATTTCTCA 2372 Query 37082 TGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCT 37141 |||||| |||||| |||||| | | || | || ||||| || ||| ||| ||||||| Sbjct 2371 TGTCATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCT 2312 Query 37142 GAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201 ||||||| |||| |||||||| ||| | ||||||||| |||| || |||||||| || | Sbjct 2311 GAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATT 2252 Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261 ||||||| | | |||||||| || || ||||||||||| | || || | |||| Sbjct 2251 CATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTAT 2192 Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321 ||| |||||| ||| | || | | | | ||||| || |||||||||||| | || | Sbjct 2191 TTCGCAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAG 2132 Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381 | | ||| | |||| | || | || ||||| || |||||| | | || Sbjct 2131 GAGTAACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAAC 2072 Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441 | ||||| | || || | || ||||| | || ||| | || ||||||||| Sbjct 2071 TTTCATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATA 2012 Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501 | |||||||| || | ||||| | | || ||||||| | ||| || || | || | || Sbjct 2011 TAGTTTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCA 1952 Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547 | | ||| |||| |||||||| || || ||||| || || || Sbjct 1951 TCAGAAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGG 1906 Score = 154 bits (170), Expect = 1e-32 Identities = 341/502 (68%), Gaps = 12/502 (2%) Strand=Plus/Minus Query 37907 TTTTCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATA 37966 |||||| | ||||||| || || || | | | ||| || | ||||| | || | || Sbjct 1411 TTTTCTGTTTTTCGTACTCAATGTAAAGATCCTCAAATTCTTGACCCCAAGCGTCACTTA 1352 Query 37967 ATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCA 38026 |||| |||| | ||| ||||||| ||||| || ||||| ||| || | || || Sbjct 1351 ATCCACGACAATGATTTGGGCACATTAAGGACCAATCCTCATCGGCTTCAACTCTTTTCA 1292 Query 38027 TAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT-TCTTCGTTC 38085 |||||||||||| | ||| || || ||| || ||| | | ||| ||| ||||| || Sbjct 1291 TAAATAAATCAGAAATCCACAAGGCGTAAAACAAGTCTCTAGCTCT-TATCTCTTCATTT 1233 Query 38086 CCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || ||||| |||||| |||| || ||| | || ||||| || |||||||| || | ||| Sbjct 1232 CCCACATTTTTTCTT-AGCTCTAAAAATGCAAAAATATCCGCATGCCATGGCTCAAGATA 1174 Query 38145 AATCGACATTGCT-CCTGGTCTTTTATCACCTCCCTGATTAATATATC---TAACTGTGT 38200 ||| | || ||| ||||| | |||| || ||||||| || |||| ||| | Sbjct 1173 AATAG-CAAAGCTACCTGGGCGCTTATTTCCACCCTGATCAACGTATCGCGAAAC---AT 1118 Query 38201 TATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATAT 38260 ||||| | | ||||||| || || | || || || || |||| | |||| Sbjct 1117 TATTAAAGACCCTTAACAATGGAACAAGGCCGTTCGAAAAACCACAAGTACCCGCAATAT 1058 Query 38261 AAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATA 38320 | | || ||| || |||||| | |||||| ||||| || || ||||| |||| Sbjct 1057 ACGAGCCAGAAGCCCGAATATTATGAAGATGCAATCCAATTCCTCCAGCGTGTTTCGATA 998 Query 38321 TTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380 | | ||| |||| || | || |||||||| || || || |||||||| || || | | Sbjct 997 TCATAGCACATTCCTTAACAGTGTCAAATATGCCCTCAATGCTGTCATCTTTCATAGCAA 938 Query 38381 GTATAAAACAACTAGACATTTG 38402 | |||||||| | || ||| Sbjct 937 TCAAGAAACAACTTGCCAATTG 916 >seq31035 Length=4879 Score = 248 bits (274), Expect = 8e-61 Identities = 519/766 (68%), Gaps = 13/766 (2%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||| | || ||||||| ||| | | | ||||| | |||||| | |||||| Sbjct 2222 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2281 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATG--TAGGAT 36907 || || ||| |||| ||| ||| |||||||| |||| ||| |||| | || | Sbjct 2282 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGT--TATGCTTCGGTT 2339 Query 36908 TATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCA 36967 | | | | || ||| || ||||||||||| ||| ||| | | | ||| || | || Sbjct 2340 CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACA 2399 Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 | || | |||| | | ||||| ||||| |||||||| | |||||||| | Sbjct 2400 TATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTT 2459 Query 37028 CTGGTAAATCTAA---ATGTT--GAATAGAACCATTATGTAACAC-AATTGTATTCTTTA 37081 || ||||| | ||||| ||| || ||||| | || || || | ||| | | Sbjct 2460 GAGG--AATCTCAGCAATGTTTTGAACCGATCCATTGT-TAGCAATAAGTTGATTTCTCA 2516 Query 37082 TGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCT 37141 |||||| |||||| |||||| | | || | || ||||| || ||| ||| ||||||| Sbjct 2517 TGTCATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCT 2576 Query 37142 GAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201 ||||||| |||| |||||||| ||| | ||||||||| |||| || |||||||| || | Sbjct 2577 GAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATT 2636 Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261 ||||||| | | |||||||| || || ||||||||||| | || || | |||| Sbjct 2637 CATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTAT 2696 Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321 ||| |||||| ||| | || | | | | ||||| || |||||||||||| | || | Sbjct 2697 TTCGCAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAG 2756 Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381 | | ||| | |||| | || | || ||||| || |||||| | | || Sbjct 2757 GAGTAACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAAC 2816 Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441 | ||||| | || || | || ||||| | || ||| | || ||||||||| Sbjct 2817 TTTCATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATA 2876 Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501 | |||||||| || | ||||| | | || ||||||| | ||| || || | || | || Sbjct 2877 TAGTTTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCA 2936 Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547 | | ||| |||| |||||||| || || ||||| || || || Sbjct 2937 TCAGAAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGG 2982 Score = 154 bits (170), Expect = 1e-32 Identities = 341/502 (68%), Gaps = 12/502 (2%) Strand=Plus/Plus Query 37907 TTTTCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATA 37966 |||||| | ||||||| || || || | | | ||| || | ||||| | || | || Sbjct 3477 TTTTCTGTTTTTCGTACTCAATGTAAAGATCCTCAAATTCTTGACCCCAAGCGTCACTTA 3536 Query 37967 ATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCA 38026 |||| |||| | ||| ||||||| ||||| || ||||| ||| || | || || Sbjct 3537 ATCCACGACAATGATTTGGGCACATTAAGGACCAATCCTCATCGGCTTCAACTCTTTTCA 3596 Query 38027 TAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT-TCTTCGTTC 38085 |||||||||||| | ||| || || ||| || ||| | | ||| ||| ||||| || Sbjct 3597 TAAATAAATCAGAAATCCACAAGGCGTAAAACAAGTCTCTAGCTCT-TATCTCTTCATTT 3655 Query 38086 CCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || ||||| |||||| |||| || ||| | || ||||| || |||||||| || | ||| Sbjct 3656 CCCACATTTTTTCTT-AGCTCTAAAAATGCAAAAATATCCGCATGCCATGGCTCAAGATA 3714 Query 38145 AATCGACATTGCT-CCTGGTCTTTTATCACCTCCCTGATTAATATATC---TAACTGTGT 38200 ||| | || ||| ||||| | |||| || ||||||| || |||| ||| | Sbjct 3715 AATAG-CAAAGCTACCTGGGCGCTTATTTCCACCCTGATCAACGTATCGCGAAAC---AT 3770 Query 38201 TATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATAT 38260 ||||| | | ||||||| || || | || || || || |||| | |||| Sbjct 3771 TATTAAAGACCCTTAACAATGGAACAAGGCCGTTCGAAAAACCACAAGTACCCGCAATAT 3830 Query 38261 AAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATA 38320 | | || ||| || |||||| | |||||| ||||| || || ||||| |||| Sbjct 3831 ACGAGCCAGAAGCCCGAATATTATGAAGATGCAATCCAATTCCTCCAGCGTGTTTCGATA 3890 Query 38321 TTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380 | | ||| |||| || | || |||||||| || || || |||||||| || || | | Sbjct 3891 TCATAGCACATTCCTTAACAGTGTCAAATATGCCCTCAATGCTGTCATCTTTCATAGCAA 3950 Query 38381 GTATAAAACAACTAGACATTTG 38402 | |||||||| | || ||| Sbjct 3951 TCAAGAAACAACTTGCCAATTG 3972 >seq31034 Length=4877 Score = 248 bits (274), Expect = 8e-61 Identities = 519/766 (68%), Gaps = 13/766 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||| | || ||||||| ||| | | | ||||| | |||||| | |||||| Sbjct 2592 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2533 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATG--TAGGAT 36907 || || ||| |||| ||| ||| |||||||| |||| ||| |||| | || | Sbjct 2532 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGT--TATGCTTCGGTT 2475 Query 36908 TATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCA 36967 | | | | || ||| || ||||||||||| ||| ||| | | | ||| || | || Sbjct 2474 CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACA 2415 Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 | || | |||| | | ||||| ||||| |||||||| | |||||||| | Sbjct 2414 TATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTT 2355 Query 37028 CTGGTAAATCTAA---ATGTT--GAATAGAACCATTATGTAACAC-AATTGTATTCTTTA 37081 || ||||| | ||||| ||| || ||||| | || || || | ||| | | Sbjct 2354 GAGG--AATCTCAGCAATGTTTTGAACCGATCCATTGT-TAGCAATAAGTTGATTTCTCA 2298 Query 37082 TGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCT 37141 |||||| |||||| |||||| | | || | || ||||| || ||| ||| ||||||| Sbjct 2297 TGTCATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCT 2238 Query 37142 GAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201 ||||||| |||| |||||||| ||| | ||||||||| |||| || |||||||| || | Sbjct 2237 GAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATT 2178 Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261 ||||||| | | |||||||| || || ||||||||||| | || || | |||| Sbjct 2177 CATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTAT 2118 Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321 ||| |||||| ||| | || | | | | ||||| || |||||||||||| | || | Sbjct 2117 TTCGCAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAG 2058 Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381 | | ||| | |||| | || | || ||||| || |||||| | | || Sbjct 2057 GAGTAACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAAC 1998 Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441 | ||||| | || || | || ||||| | || ||| | || ||||||||| Sbjct 1997 TTTCATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATA 1938 Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501 | |||||||| || | ||||| | | || ||||||| | ||| || || | || | || Sbjct 1937 TAGTTTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCA 1878 Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547 | | ||| |||| |||||||| || || ||||| || || || Sbjct 1877 TCAGAAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGG 1832 Score = 154 bits (170), Expect = 1e-32 Identities = 341/502 (68%), Gaps = 12/502 (2%) Strand=Plus/Minus Query 37907 TTTTCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATA 37966 |||||| | ||||||| || || || | | | ||| || | ||||| | || | || Sbjct 1337 TTTTCTGTTTTTCGTACTCAATGTAAAGATCCTCAAATTCTTGACCCCAAGCGTCACTTA 1278 Query 37967 ATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCA 38026 |||| |||| | ||| ||||||| ||||| || ||||| ||| || | || || Sbjct 1277 ATCCACGACAATGATTTGGGCACATTAAGGACCAATCCTCATCGGCTTCAACTCTTTTCA 1218 Query 38027 TAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT-TCTTCGTTC 38085 |||||||||||| | ||| || || ||| || ||| | | ||| ||| ||||| || Sbjct 1217 TAAATAAATCAGAAATCCACAAGGCGTAAAACAAGTCTCTAGCTCT-TATCTCTTCATTT 1159 Query 38086 CCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || ||||| |||||| |||| || ||| | || ||||| || |||||||| || | ||| Sbjct 1158 CCCACATTTTTTCTT-AGCTCTAAAAATGCAAAAATATCCGCATGCCATGGCTCAAGATA 1100 Query 38145 AATCGACATTGCT-CCTGGTCTTTTATCACCTCCCTGATTAATATATC---TAACTGTGT 38200 ||| | || ||| ||||| | |||| || ||||||| || |||| ||| | Sbjct 1099 AATAG-CAAAGCTACCTGGGCGCTTATTTCCACCCTGATCAACGTATCGCGAAAC---AT 1044 Query 38201 TATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATAT 38260 ||||| | | ||||||| || || | || || || || |||| | |||| Sbjct 1043 TATTAAAGACCCTTAACAATGGAACAAGGCCGTTCGAAAAACCACAAGTACCCGCAATAT 984 Query 38261 AAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATA 38320 | | || ||| || |||||| | |||||| ||||| || || ||||| |||| Sbjct 983 ACGAGCCAGAAGCCCGAATATTATGAAGATGCAATCCAATTCCTCCAGCGTGTTTCGATA 924 Query 38321 TTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380 | | ||| |||| || | || |||||||| || || || |||||||| || || | | Sbjct 923 TCATAGCACATTCCTTAACAGTGTCAAATATGCCCTCAATGCTGTCATCTTTCATAGCAA 864 Query 38381 GTATAAAACAACTAGACATTTG 38402 | |||||||| | || ||| Sbjct 863 TCAAGAAACAACTTGCCAATTG 842 >seq61479 Length=12598 Score = 100 bits (110), Expect = 3e-16 Identities = 348/540 (64%), Gaps = 51/540 (9%) Strand=Plus/Minus Query 11281 TTAAAAATCTATATCC-GT-AGAAAATATATTCTCTTCTTTATTTGTAAACACCCCCATC 11338 ||||||||| ||||| || |||||| | ||| || | ||| | ||| || | Sbjct 7177 TTAAAAATCAGTATCCAGTGAGAAAACACGTTCC--TCGGCACTTGACATCACTCCTGGC 7120 Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398 ||||||||||| ||| || ||| ||||| || ||||| ||||| || || || | Sbjct 7119 TTTTGATATTCCGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTCAAGAGAGATGTTT 7060 Query 11399 TCCATAAAGCTAAAAGGATTATA---TACATTGAAGACTTTTTCACAACCTAACT-CTGT 11454 |||||||| |||||| ||| | || |||| |||| | ||| || | || | Sbjct 7059 TCCATAAAATCAAAAGGGTTAACGGTTCCA---AAGA-TTTTGCTGTACCCAAGTTCTAT 7004 Query 11455 TAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACA-ATTCATACCTA 11513 | | ||||| || || ||||| || || | | |||| | | || |||||| || | Sbjct 7003 CATGAGCCTATCAGCAACAAATTCAATGTAATCACACAT-ATCCTTCACATTCATTCCAA 6945 Query 11514 TAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGA 11573 |||| | || |||| ||| | | ||||| |||||||| | || ||||||||| ||| Sbjct 6944 TAAGTTTAACAGGAAGAGCTTCACTGAAAAATTCCTTTTCAACATCAACCGCATCTTTGA 6885 Query 11574 TTAT--CGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACA 11631 | || | || | ||| | || ||| || || || | | ||||| | ||| Sbjct 6884 TCATTTCAACAACAATGCTTTCG--GAAGGTTTATTTATCAACTTACTGAACATAAGACA 6827 Query 11632 CGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCC 11691 |||||||| ||| | ||||| || | |||||||| || ||| | || | ||| Sbjct 6826 GGCAAAATCTGTATGAAGCCCTTCATCACGACTTATTAACTCGTTACTATGGGTAAGTCC 6767 Query 11692 GGGCATCAATCCTC---------------------------------GtttttttATCCA 11718 ||||| | || | |||| || | ||| Sbjct 6766 TGGCATGAGACCACTAAATTATTAATACAGTTCCATATTAACCAACCGTTTCTTGAGCCA 6707 Query 11719 AAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTAC 11778 || || ||||| |||||||||||||| ||||||||||| |||||||||||||| ||||| Sbjct 6706 GAAAATTGCAGCGAATGAACCAGAAAAAAATATTCCCTCAACAGCTGCAAATGCAACTAC 6647 >seq8514 Length=8580 Score = 100 bits (110), Expect = 3e-16 Identities = 348/540 (64%), Gaps = 51/540 (9%) Strand=Plus/Plus Query 11281 TTAAAAATCTATATCC-GT-AGAAAATATATTCTCTTCTTTATTTGTAAACACCCCCATC 11338 ||||||||| ||||| || |||||| | ||| || | ||| | ||| || | Sbjct 5638 TTAAAAATCAGTATCCAGTGAGAAAACACGTTCC--TCGGCACTTGACATCACTCCTGGC 5695 Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398 ||||||||||| ||| || ||| ||||| || ||||| ||||| || || || | Sbjct 5696 TTTTGATATTCCGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTCAAGAGAGATGTTT 5755 Query 11399 TCCATAAAGCTAAAAGGATTATA---TACATTGAAGACTTTTTCACAACCTAACT-CTGT 11454 |||||||| |||||| ||| | || |||| |||| | ||| || | || | Sbjct 5756 TCCATAAAATCAAAAGGGTTAACGGTTCCA---AAGA-TTTTGCTGTACCCAAGTTCTAT 5811 Query 11455 TAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACA-ATTCATACCTA 11513 | | ||||| || || ||||| || || | | |||| | | || |||||| || | Sbjct 5812 CATGAGCCTATCAGCAACAAATTCAATGTAATCACACAT-ATCCTTCACATTCATTCCAA 5870 Query 11514 TAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGA 11573 |||| | || |||| ||| | | ||||| |||||||| | || ||||||||| ||| Sbjct 5871 TAAGTTTAACAGGAAGAGCTTCACTGAAAAATTCCTTTTCAACATCAACCGCATCTTTGA 5930 Query 11574 TTAT--CGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACA 11631 | || | || | ||| | || ||| || || || | | ||||| | ||| Sbjct 5931 TCATTTCAACAACAATGCTTTCG--GAAGGTTTATTTATCAACTTACTGAACATAAGACA 5988 Query 11632 CGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCC 11691 |||||||| ||| | ||||| || | |||||||| || ||| | || | ||| Sbjct 5989 GGCAAAATCTGTATGAAGCCCTTCATCACGACTTATTAACTCGTTACTATGGGTAAGTCC 6048 Query 11692 GGGCATCAATCCTC---------------------------------GtttttttATCCA 11718 ||||| | || | |||| || | ||| Sbjct 6049 TGGCATGAGACCACTAAATTATTAATACAGTTCCATATTAACCAACCGTTTCTTGAGCCA 6108 Query 11719 AAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTAC 11778 || || ||||| |||||||||||||| ||||||||||| |||||||||||||| ||||| Sbjct 6109 GAAAATTGCAGCGAATGAACCAGAAAAAAATATTCCCTCAACAGCTGCAAATGCAACTAC 6168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468109487904160