Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq33280 107 2e-18 >seq33280 Length=5083 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| |||||||| ||||| ||||| | || ||| ||||| | || |||||| Sbjct 209 GTAGACTCCTTTTGAATATTATAGTCGCTTAAGGTCCTCCCATCTTCTAATTGCTTACCA 268 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| | || || | ||||| || ||||| || ||||| ||||| ||| |||| | ||| Sbjct 269 GCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCT-TGAATTTTAGATTT 327 Query 139688 AGCTGTTCCACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | | || | ||||| || ||| || |||| || | ||||| || ||||| || Sbjct 328 AACATTCTCAATCGTGTCACTGCTCTCAACATCAAGAGTAATAGTCTTACCAGTCAAAGT 387 Query 139747 TTTTACGAATATTTGCAT 139764 || || ||||||||||| Sbjct 388 CTTCACAAATATTTGCAT 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495624276468800