Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq61479 127 2e-24 seq8514 127 2e-24 >seq61479 Length=12598 Score = 127 bits (140), Expect = 2e-24 Identities = 185/256 (72%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 21127 TTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTT 21186 ||||||||||| ||| | |||||||||| || || ||||||| | ||| || Sbjct 7177 TTAAAAATCAGTATCCAGTGAGAAAACACGTTCCTCGGCACTTGACATCACTCCTGGCTT 7118 Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246 |||||| || ||| | ||||| ||||| || ||||| ||||| | || || ||| Sbjct 7117 TTGATATTCCGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTCAAGAGAGATGTTTTC 7058 Query 21247 CATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAA 21306 |||||||||||| || || | | | ||| ||||| | | || |||||| || || | Sbjct 7057 CATAAAATCAAAAGGGTTAACGGTTCCAAAGATTTTGCTGTACCCAAGTTCT-ATCATGA 6999 Query 21307 TC-TATCTGCTACAAATTCTATATATTGACACAT-TAATTCACAATTCATACCGATCAAT 21364 | |||| || |||||||| || || | |||||| | |||||| ||||| || || | | Sbjct 6998 GCCTATCAGCAACAAATTCAATGTAATCACACATATCCTTCACA-TTCATTCCAATAAGT 6940 Query 21365 TTTACAGGAAGAGCTT 21380 || ||||||||||||| Sbjct 6939 TTAACAGGAAGAGCTT 6924 >seq8514 Length=8580 Score = 127 bits (140), Expect = 2e-24 Identities = 185/256 (72%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 21127 TTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTT 21186 ||||||||||| ||| | |||||||||| || || ||||||| | ||| || Sbjct 5638 TTAAAAATCAGTATCCAGTGAGAAAACACGTTCCTCGGCACTTGACATCACTCCTGGCTT 5697 Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246 |||||| || ||| | ||||| ||||| || ||||| ||||| | || || ||| Sbjct 5698 TTGATATTCCGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTCAAGAGAGATGTTTTC 5757 Query 21247 CATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT-A 21305 |||||||||||| || || | | | ||| ||||| | | || |||||| || || | Sbjct 5758 CATAAAATCAAAAGGGTTAACGGTTCCAAAGATTTTGCTGTACCCAAGTTCT-ATCATGA 5816 Query 21306 ATCTATCTGCTACAAATTCTATATATTGACACAT-TAATTCACAATTCATACCGATCAAT 21364 ||||| || |||||||| || || | |||||| | ||||| |||||| || || | | Sbjct 5817 GCCTATCAGCAACAAATTCAATGTAATCACACATATCCTTCAC-ATTCATTCCAATAAGT 5875 Query 21365 TTTACAGGAAGAGCTT 21380 || ||||||||||||| Sbjct 5876 TTAACAGGAAGAGCTT 5891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531429309833360