Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq43997 116 3e-21 seq43996 116 3e-21 >seq43997 Length=5328 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | ||||| ||| | || ||| | || || ||| | Sbjct 4838 ATGCAGATATTTGTGAAAACCCTCACTGGGAAAACAATAACCCTGGACGTTGAGTCTTCT 4779 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || ||| || ||| || || || || || ||||| |||||| Sbjct 4778 GATACGATTGAGAACGTTAAAACGAAAATTCAGGATAAGGAGGGTATTCCTCCGGATCAA 4719 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | || ||| || ||| | || |||| |||| | ||||| |||||| Sbjct 4718 CAGAGATTGATATTCGCCGGGAAACAATTGGAGGATGGAAGAACATTAAGCGACTATAAC 4659 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| |||||||| || | ||||| || | |||||||| ||||| Sbjct 4658 ATTCAGAAAGAATCCACTTTACATTTGGTCCTGAGATTGAGGGGAGG 4612 >seq43996 Length=5100 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | ||||| ||| | || ||| | || || ||| | Sbjct 4838 ATGCAGATATTTGTGAAAACCCTCACTGGGAAAACAATAACCCTGGACGTTGAGTCTTCT 4779 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || ||| || ||| || || || || || ||||| |||||| Sbjct 4778 GATACGATTGAGAACGTTAAAACGAAAATTCAGGATAAGGAGGGTATTCCTCCGGATCAA 4719 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | || ||| || ||| | || |||| |||| | ||||| |||||| Sbjct 4718 CAGAGATTGATATTCGCCGGGAAACAATTGGAGGATGGAAGAACATTAAGCGACTATAAC 4659 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| |||||||| || | ||||| || | |||||||| ||||| Sbjct 4658 ATTCAGAAAGAATCCACTTTACATTTGGTCCTGAGATTGAGGGGAGG 4612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429564421631670