Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq54562 192 7e-44 seq39983 192 7e-44 seq34305 192 7e-44 seq31035 192 7e-44 seq31034 192 7e-44 seq61479 96.9 4e-15 seq8514 93.3 5e-14 >seq54562 Length=4898 Score = 192 bits (212), Expect = 7e-44 Identities = 515/789 (65%), Gaps = 5/789 (1%) Strand=Plus/Plus Query 61844 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 61903 |||| ||||| ||||| ||| | ||||||| | || | || ||| || | || ||| Sbjct 2307 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2366 Query 61904 TTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCT 61963 || ||||| |||| ||| ||| ||||||||||| | |||| || |||| ||| Sbjct 2367 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGTTATGCTTCGGTTCT 2426 Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023 || | | ||||||| ||| ||||||||||| || | | | | ||| |||| ||| Sbjct 2427 GCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACATA 2486 Query 62024 TTTATAATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 62082 | ||||| || | | | || | |||||| |||||||||| || ||||||| Sbjct 2487 TCAATAATAGT-TCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTTG 2545 Query 62083 TGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTC 62139 |||| | | | || |||| |||||| | || |||| ||| | || || Sbjct 2546 AGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCATGTC 2605 Query 62140 ATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62199 ||||||||||| ||| | | ||| | || | ||||| |||||| || ||||| Sbjct 2606 ATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCTGAAA 2665 Query 62200 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 62259 || |||| ||||||| | || ||| ||||| | || || ||||| | || ||||| Sbjct 2666 ATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATTCATT 2725 Query 62260 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62319 ||| || | |||||||| |||||| ||||| |||||| | || ||||||||||| Sbjct 2726 ATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTATTTCG 2785 Query 62320 AAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTAC 62379 | |||| | | | | ||| ||||||| || ||||||| ||| | | || || Sbjct 2786 CAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAGGAGT 2845 Query 62380 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 62439 ||| || | || ||||| || || ||| | || | || Sbjct 2846 AACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAACTTTC 2905 Query 62440 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62499 |||| || | | ||| || |||||| | || || | || || ||||| || || Sbjct 2906 ATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATATAGT 2965 Query 62500 TTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62559 ||||||||||| |||| || | | ||||| ||| ||||| || || | | || Sbjct 2966 TTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCATCAG 3025 Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 || ||| || || || || ||||| || || || || ||||| | || | ||||| || Sbjct 3026 AAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGGACGGTGACGTTTATTGGA 3085 Query 62620 GATTTCAGC 62628 ||| ||| Sbjct 3086 AGTTTTAGC 3094 >seq39983 Length=4877 Score = 192 bits (212), Expect = 7e-44 Identities = 515/789 (65%), Gaps = 5/789 (1%) Strand=Plus/Plus Query 61844 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 61903 |||| ||||| ||||| ||| | ||||||| | || | || ||| || | || ||| Sbjct 2286 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2345 Query 61904 TTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCT 61963 || ||||| |||| ||| ||| ||||||||||| | |||| || |||| ||| Sbjct 2346 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGTTATGCTTCGGTTCT 2405 Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023 || | | ||||||| ||| ||||||||||| || | | | | ||| |||| ||| Sbjct 2406 GCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACATA 2465 Query 62024 TTTATAATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 62082 | ||||| || | | | || | |||||| |||||||||| || ||||||| Sbjct 2466 TCAATAATAGT-TCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTTG 2524 Query 62083 TGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTC 62139 |||| | | | || |||| |||||| | || |||| ||| | || || Sbjct 2525 AGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCATGTC 2584 Query 62140 ATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62199 ||||||||||| ||| | | ||| | || | ||||| |||||| || ||||| Sbjct 2585 ATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCTGAAA 2644 Query 62200 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 62259 || |||| ||||||| | || ||| ||||| | || || ||||| | || ||||| Sbjct 2645 ATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATTCATT 2704 Query 62260 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62319 ||| || | |||||||| |||||| ||||| |||||| | || ||||||||||| Sbjct 2705 ATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTATTTCG 2764 Query 62320 AAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTAC 62379 | |||| | | | | ||| ||||||| || ||||||| ||| | | || || Sbjct 2765 CAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAGGAGT 2824 Query 62380 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 62439 ||| || | || ||||| || || ||| | || | || Sbjct 2825 AACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAACTTTC 2884 Query 62440 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62499 |||| || | | ||| || |||||| | || || | || || ||||| || || Sbjct 2885 ATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATATAGT 2944 Query 62500 TTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62559 ||||||||||| |||| || | | ||||| ||| ||||| || || | | || Sbjct 2945 TTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCATCAG 3004 Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 || ||| || || || || ||||| || || || || ||||| | || | ||||| || Sbjct 3005 AAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGGACGGTGACGTTTATTGGA 3064 Query 62620 GATTTCAGC 62628 ||| ||| Sbjct 3065 AGTTTTAGC 3073 >seq34305 Length=4887 Score = 192 bits (212), Expect = 7e-44 Identities = 515/789 (65%), Gaps = 5/789 (1%) Strand=Plus/Minus Query 61844 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 61903 |||| ||||| ||||| ||| | ||||||| | || | || ||| || | || ||| Sbjct 2666 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2607 Query 61904 TTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCT 61963 || ||||| |||| ||| ||| ||||||||||| | |||| || |||| ||| Sbjct 2606 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGTTATGCTTCGGTTCT 2547 Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023 || | | ||||||| ||| ||||||||||| || | | | | ||| |||| ||| Sbjct 2546 GCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACATA 2487 Query 62024 TTTATAATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 62082 | ||||| || | | | || | |||||| |||||||||| || ||||||| Sbjct 2486 TCAATAATAGT-TCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTTG 2428 Query 62083 TGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTC 62139 |||| | | | || |||| |||||| | || |||| ||| | || || Sbjct 2427 AGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCATGTC 2368 Query 62140 ATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62199 ||||||||||| ||| | | ||| | || | ||||| |||||| || ||||| Sbjct 2367 ATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCTGAAA 2308 Query 62200 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 62259 || |||| ||||||| | || ||| ||||| | || || ||||| | || ||||| Sbjct 2307 ATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATTCATT 2248 Query 62260 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62319 ||| || | |||||||| |||||| ||||| |||||| | || ||||||||||| Sbjct 2247 ATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTATTTCG 2188 Query 62320 AAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTAC 62379 | |||| | | | | ||| ||||||| || ||||||| ||| | | || || Sbjct 2187 CAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAGGAGT 2128 Query 62380 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 62439 ||| || | || ||||| || || ||| | || | || Sbjct 2127 AACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAACTTTC 2068 Query 62440 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62499 |||| || | | ||| || |||||| | || || | || || ||||| || || Sbjct 2067 ATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATATAGT 2008 Query 62500 TTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62559 ||||||||||| |||| || | | ||||| ||| ||||| || || | | || Sbjct 2007 TTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCATCAG 1948 Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 || ||| || || || || ||||| || || || || ||||| | || | ||||| || Sbjct 1947 AAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGGACGGTGACGTTTATTGGA 1888 Query 62620 GATTTCAGC 62628 ||| ||| Sbjct 1887 AGTTTTAGC 1879 >seq31035 Length=4879 Score = 192 bits (212), Expect = 7e-44 Identities = 515/789 (65%), Gaps = 5/789 (1%) Strand=Plus/Plus Query 61844 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 61903 |||| ||||| ||||| ||| | ||||||| | || | || ||| || | || ||| Sbjct 2222 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2281 Query 61904 TTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCT 61963 || ||||| |||| ||| ||| ||||||||||| | |||| || |||| ||| Sbjct 2282 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGTTATGCTTCGGTTCT 2341 Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023 || | | ||||||| ||| ||||||||||| || | | | | ||| |||| ||| Sbjct 2342 GCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACATA 2401 Query 62024 TTTATAATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 62082 | ||||| || | | | || | |||||| |||||||||| || ||||||| Sbjct 2402 TCAATAATAGT-TCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTTG 2460 Query 62083 TGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTC 62139 |||| | | | || |||| |||||| | || |||| ||| | || || Sbjct 2461 AGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCATGTC 2520 Query 62140 ATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62199 ||||||||||| ||| | | ||| | || | ||||| |||||| || ||||| Sbjct 2521 ATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCTGAAA 2580 Query 62200 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 62259 || |||| ||||||| | || ||| ||||| | || || ||||| | || ||||| Sbjct 2581 ATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATTCATT 2640 Query 62260 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62319 ||| || | |||||||| |||||| ||||| |||||| | || ||||||||||| Sbjct 2641 ATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTATTTCG 2700 Query 62320 AAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTAC 62379 | |||| | | | | ||| ||||||| || ||||||| ||| | | || || Sbjct 2701 CAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAGGAGT 2760 Query 62380 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 62439 ||| || | || ||||| || || ||| | || | || Sbjct 2761 AACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAACTTTC 2820 Query 62440 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62499 |||| || | | ||| || |||||| | || || | || || ||||| || || Sbjct 2821 ATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATATAGT 2880 Query 62500 TTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62559 ||||||||||| |||| || | | ||||| ||| ||||| || || | | || Sbjct 2881 TTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCATCAG 2940 Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 || ||| || || || || ||||| || || || || ||||| | || | ||||| || Sbjct 2941 AAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGGACGGTGACGTTTATTGGA 3000 Query 62620 GATTTCAGC 62628 ||| ||| Sbjct 3001 AGTTTTAGC 3009 >seq31034 Length=4877 Score = 192 bits (212), Expect = 7e-44 Identities = 515/789 (65%), Gaps = 5/789 (1%) Strand=Plus/Minus Query 61844 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 61903 |||| ||||| ||||| ||| | ||||||| | || | || ||| || | || ||| Sbjct 2592 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2533 Query 61904 TTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCT 61963 || ||||| |||| ||| ||| ||||||||||| | |||| || |||| ||| Sbjct 2532 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATTTGTTATGCTTCGGTTCT 2473 Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023 || | | ||||||| ||| ||||||||||| || | | | | ||| |||| ||| Sbjct 2472 GCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGACATA 2413 Query 62024 TTTATAATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 62082 | ||||| || | | | || | |||||| |||||||||| || ||||||| Sbjct 2412 TCAATAATAGT-TCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATCTTG 2354 Query 62083 TGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTC 62139 |||| | | | || |||| |||||| | || |||| ||| | || || Sbjct 2353 AGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCATGTC 2294 Query 62140 ATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62199 ||||||||||| ||| | | ||| | || | ||||| |||||| || ||||| Sbjct 2293 ATCATTCCATATATTTAAATTAATCAAATCACTCAAAAGATGTCTATTAACAACCTGAAA 2234 Query 62200 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 62259 || |||| ||||||| | || ||| ||||| | || || ||||| | || ||||| Sbjct 2233 ATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCGATTCATT 2174 Query 62260 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62319 ||| || | |||||||| |||||| ||||| |||||| | || ||||||||||| Sbjct 2173 ATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCATAAGAGCGGTTCTTAAACTATTTCG 2114 Query 62320 AAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTAC 62379 | |||| | | | | ||| ||||||| || ||||||| ||| | | || || Sbjct 2113 CAATCCGTGTTTCTTTACTTTTTCTTTTAAAGAATCCCAATCCCATAATTTTGAAGGAGT 2054 Query 62380 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 62439 ||| || | || ||||| || || ||| | || | || Sbjct 2053 AACCCCCCATAAATCAAAAGACAGCAACCCCTTACTTGCAGGAGAACCTTCGTAACTTTC 1994 Query 62440 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62499 |||| || | | ||| || |||||| | || || | || || ||||| || || Sbjct 1993 ATATGAACCATATTCCTCTGCCAGTTCAACAGAAGCTTCAATGGCCCCATAATATATAGT 1934 Query 62500 TTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62559 ||||||||||| |||| || | | ||||| ||| ||||| || || | | || Sbjct 1933 TTCGAAGATCTCAATATTAAGTTTTCTTGCTTCATTGCTGTCAAAAGGGTACCTCATCAG 1874 Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 || ||| || || || || ||||| || || || || ||||| | || | ||||| || Sbjct 1873 AAGAAAAGCATCCGCCAAACCTTGTACGCCGATCCCAATAGGACGGTGACGTTTATTGGA 1814 Query 62620 GATTTCAGC 62628 ||| ||| Sbjct 1813 AGTTTTAGC 1805 >seq61479 Length=12598 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| ||| | ||||| || ||||| || || ||| |||| | || || || || || Sbjct 3985 ATCCAGTTTAGGGCCCATTCAGCCTTTTTCTTGACAGAAGGAAGGGTTTCGATGGCTTTG 3926 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 || | ||| ||| | | ||||||| || ||||||||||| | ||| |||||| Sbjct 3925 AACAACCTATTTCGTTCTTCGATTTCTTTAATGTACGTATCAATCAACAAACTGTACATT 3866 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || || || || ||||| | || ||||| || |||||||| ||||| || || || | Sbjct 3865 TCAGAGTGGATATTTTCCACCGCAATTTGGAACCCGTAGAAACATCTTGCTTCTGTCGCC 3806 Query 33018 TGTACTTC 33025 || ||||| Sbjct 3805 TGAACTTC 3798 Score = 93.3 bits (102), Expect = 5e-14 Identities = 179/259 (69%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 32355 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 32414 ||||| ||||| ||||| ||||| ||||| ||||| ||||| || || || ||| Sbjct 7134 GACATCACTCCTGGCTTTTGATATTCCGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCT 7075 Query 32415 TCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATT---ATAAAtttttttA 32471 || | || || |||||||| ||||| || || || ||| | | | ||||| | Sbjct 7074 TCAAGAGAGATGTTTTCCATAAAATCAAAAGGGTT---AACGGTTCCAAAGATTTTGCTG 7018 Query 32472 AATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCAT--TT 32529 | || | ||| || | ||||| || |||||||| || || ||| || || Sbjct 7017 TACCCAAGTTCTATCATGAGCCTATCAGCAACAAATTCAATGTAATCACACAT-ATCCTT 6959 Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAG 32589 |||| |||||||| ||||||||||| |||||||| || | | |||||| | ||||| | Sbjct 6958 CACA-TTCATTCCAATAAGTTTAACAGGAAGAGCTTCACTGAAAAATTCCTTTTCAACAT 6900 Query 32590 AGACCGCGTCTGTTATAAT 32608 ||||| ||| | || || Sbjct 6899 CAACCGCATCTTTGATCAT 6881 >seq8514 Length=8580 Score = 93.3 bits (102), Expect = 5e-14 Identities = 179/259 (69%), Gaps = 10/259 (4%) Strand=Plus/Plus Query 32355 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 32414 ||||| ||||| ||||| ||||| ||||| ||||| ||||| || || || ||| Sbjct 5681 GACATCACTCCTGGCTTTTGATATTCCGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCT 5740 Query 32415 TCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATT---ATAAAtttttttA 32471 || | || || |||||||| ||||| || || || ||| | | | ||||| | Sbjct 5741 TCAAGAGAGATGTTTTCCATAAAATCAAAAGGGTT---AACGGTTCCAAAGATTTTGCTG 5797 Query 32472 AATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCAT--TT 32529 | || | ||| || | ||||| || |||||||| || || ||| || || Sbjct 5798 TACCCAAGTTCTATCATGAGCCTATCAGCAACAAATTCAATGTAATCACACAT-ATCCTT 5856 Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAG 32589 |||| |||||||| ||||||||||| |||||||| || | | |||||| | ||||| | Sbjct 5857 CACA-TTCATTCCAATAAGTTTAACAGGAAGAGCTTCACTGAAAAATTCCTTTTCAACAT 5915 Query 32590 AGACCGCGTCTGTTATAAT 32608 ||||| ||| | || || Sbjct 5916 CAACCGCATCTTTGATCAT 5934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633070332754400