Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq43997 136 3e-27 seq33280 131 1e-25 seq43996 127 2e-24 seq54562 123 2e-23 seq39983 123 2e-23 seq34305 123 2e-23 seq31035 123 2e-23 seq31034 123 2e-23 seq61479 96.9 3e-15 seq8514 96.9 3e-15 >seq43997 Length=5328 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||||||| | || || ||||| | |||||||| || ||| | | Sbjct 5066 ATGCAAATTTTTGTTAAAACTCTTACTGGAAAAACTATAACTCTTGATGTTGAATCATCT 5007 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| ||| ||||| || |||||||| ||||| || ||||| Sbjct 5006 GACACAATCGAAAACGTTAAATCAAAGATTCAGGATAAGGAGGGCATTCCTCCTGATCAG 4947 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||| ||||| ||||| ||| | |||||| | ||| | ||||| || Sbjct 4946 CAAAGGCTTATCTTTGCGGGCAAGCAGCTCGAGGATGGAAGAACCTTGAGTGATTATAAT 4887 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || ||||| ||||||||| | ||||| ||| |||| || Sbjct 4886 ATACAAAAGGAATCCACCCTGCATTTGGTTCTGCGTTT 4849 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||||||| | || || ||||| | |||||||| || || | | Sbjct 5294 ATGCAGATATTTGTTAAAACTCTTACTGGGAAAACTATAACTCTTGATGTTGAGTCATCT 5235 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| ||| ||||| || |||||||||||||| || ||||| Sbjct 5234 GACACAATTGAAAACGTTAAATCAAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAG 5175 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||| ||||| ||||| ||| | |||||| | || | ||||||||| Sbjct 5174 CAAAGGCTTATCTTTGCTGGCAAGCAGCTCGAGGATGGAAGAACTTTGAGCGATTACAAT 5115 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| |||||||| || | ||| | || || |||||| | || ||| Sbjct 5114 ATTCAGAAAGAATCAACTTTGCATCTGGTATTACGATTGAGGGGTGGT 5067 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| | || || ||||| | || || || || || | | Sbjct 4838 ATGCAGATATTTGTGAAAACCCTCACTGGGAAAACAATAACCCTGGACGTTGAGTCTTCT 4779 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | ||| |||||||| || |||||||||||||| || |||||| Sbjct 4778 GATACGATTGAGAACGTTAAAACGAAAATTCAGGATAAGGAGGGTATTCCTCCGGATCAA 4719 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | ||||| ||||| ||||| || |||||| | || | ||| || ||| Sbjct 4718 CAGAGATTGATATTCGCCGGGAAACAATTGGAGGATGGAAGAACATTAAGCGACTATAAC 4659 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 ||||| ||||||||||| ||||||| || || ||||| | ||||| ||| Sbjct 4658 ATTCAGAAAGAATCCACTTTACATTTGGTCCTGAGATTGAGGGGAGGGTTT 4608 >seq33280 Length=5083 Score = 131 bits (144), Expect = 1e-25 Identities = 123/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||||||||||||||| |||||||| ||||| |||||||||| || ||| | | Sbjct 178 GATGCAAATTTTTGTTAAAACGTTAACCGGAAAAACCATCACTCTTGACGTTGAATCATC 119 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | | ||| ||||||||| ||||||||||| ||||| || ||||| Sbjct 118 TGACACCATTGAAAACGTGAAAACAAAAATTCAGGACAAGGAGGGAATTCCTCCTGATCA 59 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 || | ||||| || || || |||||| | |||||| Sbjct 58 GCAGAGACTTATTTTCGCTGGAAAACAGCTTGAGGAT 22 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| || ||||| || | |||||||| || || | || Sbjct 405 ATGCAAATATTTGTGAAGACTTTGACTGGTAAGACTATTACTCTTGATGTTGAGAGCAGT 346 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||||||||| |||||||| || || || Sbjct 345 GACACGATTGAGAATGTTAAATCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 286 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| || || || ||||| ||| | ||| | ||| || || Sbjct 285 CAGAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGGAGGACCTTAAGCGACTATAAT 226 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| || || || ||||| | ||| | |||||| | || || Sbjct 225 ATTCAAAAGGAGTCTACTCTACATCTTGTTCTTCGATTGAGAGGTGG 179 >seq43996 Length=5100 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||||||| | || || ||||| | |||||||| || ||| | | Sbjct 5066 ATGCAGATATTTGTTAAAACTCTTACTGGAAAAACTATAACTCTTGATGTTGAATCATCT 5007 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| ||| ||||| || |||||||| ||||| || ||||| Sbjct 5006 GACACAATCGAAAACGTTAAATCAAAGATTCAGGATAAGGAGGGCATTCCTCCTGATCAG 4947 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||| ||||| ||||| ||| | |||||| | ||| | ||||| || Sbjct 4946 CAAAGGCTTATCTTTGCGGGCAAGCAGCTCGAGGATGGAAGAACCTTGAGTGATTATAAT 4887 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || ||||| ||||||||| | ||||| ||| |||| || Sbjct 4886 ATACAAAAGGAATCCACCCTGCATTTGGTTCTGCGTTT 4849 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| | || || ||||| | || || || || || | | Sbjct 4838 ATGCAGATATTTGTGAAAACCCTCACTGGGAAAACAATAACCCTGGACGTTGAGTCTTCT 4779 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | ||| |||||||| || |||||||||||||| || |||||| Sbjct 4778 GATACGATTGAGAACGTTAAAACGAAAATTCAGGATAAGGAGGGTATTCCTCCGGATCAA 4719 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | ||||| ||||| ||||| || |||||| | || | ||| || ||| Sbjct 4718 CAGAGATTGATATTCGCCGGGAAACAATTGGAGGATGGAAGAACATTAAGCGACTATAAC 4659 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 ||||| ||||||||||| ||||||| || || ||||| | ||||| ||| Sbjct 4658 ATTCAGAAAGAATCCACTTTACATTTGGTCCTGAGATTGAGGGGAGGGTTT 4608 >seq54562 Length=4898 Score = 123 bits (136), Expect = 2e-23 Identities = 311/463 (67%), Gaps = 16/463 (3%) Strand=Plus/Plus Query 128782 TCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCTGTT 128841 ||||| || || | ||| | | ||||| || | || | ||||| || | || ||| Sbjct 2307 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2366 Query 128842 TTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGG--TGGGTT 128899 || | ||| || ||||||| ||| | ||| || | ||||| || || | | |||| Sbjct 2367 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATT-TGT-TATGCTTCGGTT 2424 Query 128900 GACT-Caa-aaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957 || ||| ||||||||| | || ||||||||||||||| | || | || || |||| Sbjct 2425 --CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGA 2482 Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017 |||| |||| | | || ||| | |||||| ||||| ||||| || | | | Sbjct 2483 CATATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATC 2542 Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077 || || || || ||||||| || || || ||||| ||||||| || |||| ||| Sbjct 2543 TTGAGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCAT 2602 Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT----A 129133 | || || | | ||| | || |||||| || |||| | ||| |||| | Sbjct 2603 GTCATCATTCCATATATTTAAATTAATCAAA---TCACTCAA-AAGATGTCTATTAACAA 2658 Query 129134 CTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACG 129193 | ||||| ||||| || || || || | | ||| || ||| | ||| | || |||| || Sbjct 2659 CCTGAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCG 2718 Query 129194 ATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236 ||||||| ||||| | ||||||| |||| || || ||||| Sbjct 2719 ATTCATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCAT 2761 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 129693 ACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTC 129752 |||||| || | ||| || || || ||| |||| | ||| || || ||||| || ||||| Sbjct 3227 ACAAATAGACGACAAGTTACACACAGCAGTTTCATCTTTATCGCTATACTCAACGATTTC 3286 Query 129753 GGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCA 129812 || || | ||| || ||| || || ||||||| || |||||||| || |||||| Sbjct 3287 AGCACAAAGATTGCTCGATTTTATAGTACCCAAATTTTTCTGATTACTCTTAGAGTTGCA 3346 Query 129813 AGCATCTTTGTACATCATGTACGGC 129837 |||||| ||||| | || ||||||| Sbjct 3347 AGCATCCTTGTATAACAAGTACGGC 3371 >seq39983 Length=4877 Score = 123 bits (136), Expect = 2e-23 Identities = 311/463 (67%), Gaps = 16/463 (3%) Strand=Plus/Plus Query 128782 TCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCTGTT 128841 ||||| || || | ||| | | ||||| || | || | ||||| || | || ||| Sbjct 2286 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2345 Query 128842 TTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGG--TGGGTT 128899 || | ||| || ||||||| ||| | ||| || | ||||| || || | | |||| Sbjct 2346 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATT-TGT-TATGCTTCGGTT 2403 Query 128900 GACT-Caa-aaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957 || ||| ||||||||| | || ||||||||||||||| | || | || || |||| Sbjct 2404 --CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGA 2461 Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017 |||| |||| | | || ||| | |||||| ||||| ||||| || | | | Sbjct 2462 CATATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATC 2521 Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077 || || || || ||||||| || || || ||||| ||||||| || |||| ||| Sbjct 2522 TTGAGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCAT 2581 Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT----A 129133 | || || | | ||| | || |||||| || |||| | ||| |||| | Sbjct 2582 GTCATCATTCCATATATTTAAATTAATCAAA---TCACTCAA-AAGATGTCTATTAACAA 2637 Query 129134 CTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACG 129193 | ||||| ||||| || || || || | | ||| || ||| | ||| | || |||| || Sbjct 2638 CCTGAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCG 2697 Query 129194 ATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236 ||||||| ||||| | ||||||| |||| || || ||||| Sbjct 2698 ATTCATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCAT 2740 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 129693 ACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTC 129752 |||||| || | ||| || || || ||| |||| | ||| || || ||||| || ||||| Sbjct 3206 ACAAATAGACGACAAGTTACACACAGCAGTTTCATCTTTATCGCTATACTCAACGATTTC 3265 Query 129753 GGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCA 129812 || || | ||| || ||| || || ||||||| || |||||||| || |||||| Sbjct 3266 AGCACAAAGATTGCTCGATTTTATAGTACCCAAATTTTTCTGATTACTCTTAGAGTTGCA 3325 Query 129813 AGCATCTTTGTACATCATGTACGGC 129837 |||||| ||||| | || ||||||| Sbjct 3326 AGCATCCTTGTATAACAAGTACGGC 3350 >seq34305 Length=4887 Score = 123 bits (136), Expect = 2e-23 Identities = 311/463 (67%), Gaps = 16/463 (3%) Strand=Plus/Minus Query 128782 TCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCTGTT 128841 ||||| || || | ||| | | ||||| || | || | ||||| || | || ||| Sbjct 2666 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2607 Query 128842 TTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGG--TGGGTT 128899 || | ||| || ||||||| ||| | ||| || | ||||| || || | | |||| Sbjct 2606 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATT-TGT-TATGCTTCGGTT 2549 Query 128900 GACT-Caa-aaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957 || ||| ||||||||| | || ||||||||||||||| | || | || || |||| Sbjct 2548 --CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGA 2491 Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017 |||| |||| | | || ||| | |||||| ||||| ||||| || | | | Sbjct 2490 CATATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATC 2431 Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077 || || || || ||||||| || || || ||||| ||||||| || |||| ||| Sbjct 2430 TTGAGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCAT 2371 Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT----A 129133 | || || | | ||| | || |||||| || |||| | ||| |||| | Sbjct 2370 GTCATCATTCCATATATTTAAATTAATCAAA---TCACTCAA-AAGATGTCTATTAACAA 2315 Query 129134 CTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACG 129193 | ||||| ||||| || || || || | | ||| || ||| | ||| | || |||| || Sbjct 2314 CCTGAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCG 2255 Query 129194 ATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236 ||||||| ||||| | ||||||| |||| || || ||||| Sbjct 2254 ATTCATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCAT 2212 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 129693 ACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTC 129752 |||||| || | ||| || || || ||| |||| | ||| || || ||||| || ||||| Sbjct 1746 ACAAATAGACGACAAGTTACACACAGCAGTTTCATCTTTATCGCTATACTCAACGATTTC 1687 Query 129753 GGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCA 129812 || || | ||| || ||| || || ||||||| || |||||||| || |||||| Sbjct 1686 AGCACAAAGATTGCTCGATTTTATAGTACCCAAATTTTTCTGATTACTCTTAGAGTTGCA 1627 Query 129813 AGCATCTTTGTACATCATGTACGGC 129837 |||||| ||||| | || ||||||| Sbjct 1626 AGCATCCTTGTATAACAAGTACGGC 1602 >seq31035 Length=4879 Score = 123 bits (136), Expect = 2e-23 Identities = 311/463 (67%), Gaps = 16/463 (3%) Strand=Plus/Plus Query 128782 TCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCTGTT 128841 ||||| || || | ||| | | ||||| || | || | ||||| || | || ||| Sbjct 2222 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2281 Query 128842 TTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGG--TGGGTT 128899 || | ||| || ||||||| ||| | ||| || | ||||| || || | | |||| Sbjct 2282 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATT-TGT-TATGCTTCGGTT 2339 Query 128900 GACT-Caa-aaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957 || ||| ||||||||| | || ||||||||||||||| | || | || || |||| Sbjct 2340 --CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGA 2397 Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017 |||| |||| | | || ||| | |||||| ||||| ||||| || | | | Sbjct 2398 CATATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATC 2457 Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077 || || || || ||||||| || || || ||||| ||||||| || |||| ||| Sbjct 2458 TTGAGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCAT 2517 Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT----A 129133 | || || | | ||| | || |||||| || |||| | ||| |||| | Sbjct 2518 GTCATCATTCCATATATTTAAATTAATCAAA---TCACTCAA-AAGATGTCTATTAACAA 2573 Query 129134 CTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACG 129193 | ||||| ||||| || || || || | | ||| || ||| | ||| | || |||| || Sbjct 2574 CCTGAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCG 2633 Query 129194 ATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236 ||||||| ||||| | ||||||| |||| || || ||||| Sbjct 2634 ATTCATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCAT 2676 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 129693 ACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTC 129752 |||||| || | ||| || || || ||| |||| | ||| || || ||||| || ||||| Sbjct 3142 ACAAATAGACGACAAGTTACACACAGCAGTTTCATCTTTATCGCTATACTCAACGATTTC 3201 Query 129753 GGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCA 129812 || || | ||| || ||| || || ||||||| || |||||||| || |||||| Sbjct 3202 AGCACAAAGATTGCTCGATTTTATAGTACCCAAATTTTTCTGATTACTCTTAGAGTTGCA 3261 Query 129813 AGCATCTTTGTACATCATGTACGGC 129837 |||||| ||||| | || ||||||| Sbjct 3262 AGCATCCTTGTATAACAAGTACGGC 3286 >seq31034 Length=4877 Score = 123 bits (136), Expect = 2e-23 Identities = 311/463 (67%), Gaps = 16/463 (3%) Strand=Plus/Minus Query 128782 TCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCTGTT 128841 ||||| || || | ||| | | ||||| || | || | ||||| || | || ||| Sbjct 2592 TCCACAGTGAACTGAATTGGATTTGCTGCGGGTCTAGTTCTTAAATAATAGACCCCAGTT 2533 Query 128842 TTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGG--TGGGTT 128899 || | ||| || ||||||| ||| | ||| || | ||||| || || | | |||| Sbjct 2532 TTGAGACCCCTCTTCCAAGCGTGAAAGTGCATACTCGTCAATT-TGT-TATGCTTCGGTT 2475 Query 128900 GACT-Caa-aaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957 || ||| ||||||||| | || ||||||||||||||| | || | || || |||| Sbjct 2474 --CTGCAACAAAAATATTCAGAGACTGACTTTGATCAATATACGGAGCACGGTCAGCAGA 2417 Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017 |||| |||| | | || ||| | |||||| ||||| ||||| || | | | Sbjct 2416 CATATCAATAATAGTTCTCATAGATAATTCCCATGATGTTTTATAAAGAACTTTTATATC 2357 Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077 || || || || ||||||| || || || ||||| ||||||| || |||| ||| Sbjct 2356 TTGAGGAATCTCAGCAATGTTTTGAACCGATCCATTGTTAGCAATAAGTTGATTTCTCAT 2297 Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT----A 129133 | || || | | ||| | || |||||| || |||| | ||| |||| | Sbjct 2296 GTCATCATTCCATATATTTAAATTAATCAAA---TCACTCAA-AAGATGTCTATTAACAA 2241 Query 129134 CTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACG 129193 | ||||| ||||| || || || || | | ||| || ||| | ||| | || |||| || Sbjct 2240 CCTGAAAATCACCAGCTAATACTCGTCTAGAGTATATATTGGTAGTGTAAGGTTCAATCG 2181 Query 129194 ATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236 ||||||| ||||| | ||||||| |||| || || ||||| Sbjct 2180 ATTCATTATTGCCAAGAATTTGAGAAGTTGAAGCAGTAGGCAT 2138 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 129693 ACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTC 129752 |||||| || | ||| || || || ||| |||| | ||| || || ||||| || ||||| Sbjct 1672 ACAAATAGACGACAAGTTACACACAGCAGTTTCATCTTTATCGCTATACTCAACGATTTC 1613 Query 129753 GGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCA 129812 || || | ||| || ||| || || ||||||| || |||||||| || |||||| Sbjct 1612 AGCACAAAGATTGCTCGATTTTATAGTACCCAAATTTTTCTGATTACTCTTAGAGTTGCA 1553 Query 129813 AGCATCTTTGTACATCATGTACGGC 129837 |||||| ||||| | || ||||||| Sbjct 1552 AGCATCCTTGTATAACAAGTACGGC 1528 >seq61479 Length=12598 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/221 (71%), Gaps = 10/221 (5%) Strand=Plus/Plus Query 117272 AATGTTCATAGAGGCGGTGGACATTGAAAAGGAATTTTTTACAACAGCTCTACCCTGTT- 117330 |||| ||| ||| ||||| || |||||||||||||||| | |||||| |||||| Sbjct 6880 AATGATCAAAGATGCGGTTGATGTTGAAAAGGAATTTTTCAGTGAAGCTCT-TCCTGTTA 6938 Query 117331 ATTTGCTGGGAATAAATGCCACGGAAATGTGTAAATACATTGAATTTGTCGCGGACAGG- 117389 | | | ||||| |||| | ||| |||||| | |||||||||||||| || || ||| Sbjct 6939 AACTTATTGGAATGAATGTGAAGGATATGTGTGATTACATTGAATTTGTTGCTGATAGGC 6998 Query 117390 TTATTAGTGGAATTGCG-ACAACCGAAACATTTTAATACGCCG--AATCCGTTCAATTTT 117446 | || | | | ||| | ||| | || | || || ||| || || || ||||| Sbjct 6999 TCATGATAGAACTTGGGTACAGCAAAATCTTTGGAA----CCGTTAACCCTTTTGATTTT 7054 Query 117447 ATGACAAACATTTCGCTGGAAGGCAAGACAAAtttttttGA 117487 ||| |||||| || || ||||| ||||| || |||||||| Sbjct 7055 ATGGAAAACATCTCTCTTGAAGGGAAGACCAACTTTTTTGA 7095 >seq8514 Length=8580 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/221 (71%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 117272 AATGTTCATAGAGGCGGTGGACATTGAAAAGGAATTTTTTACAACAGCTCTACCCTGTTA 117331 |||| ||| ||| ||||| || |||||||||||||||| | |||||| || ||||| Sbjct 5935 AATGATCAAAGATGCGGTTGATGTTGAAAAGGAATTTTTCAGTGAAGCTCTTCC-TGTTA 5877 Query 117332 TT-TGCTGGGAATAAATGCCACGGAAATGTGTAAATACATTGAATTTGTCGCGGACAGG- 117389 | | ||||| |||| | ||| |||||| | |||||||||||||| || || ||| Sbjct 5876 AACTTATTGGAATGAATGTGAAGGATATGTGTGATTACATTGAATTTGTTGCTGATAGGC 5817 Query 117390 TTATTAGTGGAATTGCG-ACAACCGAAACATTTTAATACGCCG--AATCCGTTCAATTTT 117446 | || | | | ||| | ||| | || | || || ||| || || || ||||| Sbjct 5816 TCATGATAGAACTTGGGTACAGCAAAATCTTTGGAA----CCGTTAACCCTTTTGATTTT 5761 Query 117447 ATGACAAACATTTCGCTGGAAGGCAAGACAAAtttttttGA 117487 ||| |||||| || || ||||| ||||| || |||||||| Sbjct 5760 ATGGAAAACATCTCTCTTGAAGGGAAGACCAACTTTTTTGA 5720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419365244042410