Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq43997 114 8e-21 seq43996 114 8e-21 >seq43997 Length=5328 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| |||||||||| || | ||| || ||||||||||||||||| | Sbjct 4612 CCTCCCCTCAATCTCAGGACCAAATGTAAAGTGGATTCTTTCTGAATGTTATAGTCGCTT 4671 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | |||| |||| ||| || |||||||| |||| || || || || | || Sbjct 4672 AATGTTCTTCCATCCTCCAATTGTTTCCCGGCGAATATCAATCTCTGTTGATCCGGAGGA 4731 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | ||||| ||| ||| | |||| ||| | ||| || Sbjct 4732 ATACCCTCCTTATCCTGAATTTTCGTTTTAACGTTCTCAATCGTATCAGAAGACTCAACG 4791 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | |||||| || || || |||||||| || ||||| ||||||||| Sbjct 4792 TCCAGGGTTATTGTTTTCCCAGTGAGGGTTTTCACAAATATCTGCATG 4839 >seq43996 Length=5100 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| |||||||||| || | ||| || ||||||||||||||||| | Sbjct 4612 CCTCCCCTCAATCTCAGGACCAAATGTAAAGTGGATTCTTTCTGAATGTTATAGTCGCTT 4671 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | |||| |||| ||| || |||||||| |||| || || || || | || Sbjct 4672 AATGTTCTTCCATCCTCCAATTGTTTCCCGGCGAATATCAATCTCTGTTGATCCGGAGGA 4731 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | ||||| ||| ||| | |||| ||| | ||| || Sbjct 4732 ATACCCTCCTTATCCTGAATTTTCGTTTTAACGTTCTCAATCGTATCAGAAGACTCAACG 4791 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | |||||| || || || |||||||| || ||||| ||||||||| Sbjct 4792 TCCAGGGTTATTGTTTTCCCAGTGAGGGTTTTCACAAATATCTGCATG 4839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325411315315766