Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq50184 96.9 6e-15 seq15988 96.9 6e-15 >seq50184 Length=1264 Score = 96.9 bits (106), Expect = 6e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 183058 GGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGAC-AAG 183116 ||||||||| | | | |||||||||||||||||| |||||| | || || ||| | ||| Sbjct 1001 GGAAAAATGGCTGGGTATTTACGAATGTACTGGGCCAAAAAGTTTCTGGAGTGGTCAAAG 1060 Query 183117 AACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGG 183176 ||| || ||| | || | | || || | || ||||| ||| ||| | ||||| Sbjct 1061 AAC-CCTGAACAAGCCTATCGGAATTGTCTTTACCTGAACGATAGATACAGTTTGGACGG 1119 Query 183177 TACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGC 183236 || ||||||||| ||| |||||||||||||| || | || | || || | | Sbjct 1120 TAACACCCCTAACGGAATCGTTGGTTGTATGTGGTCCATGTATGGGCTGCATGACCGTCC 1179 Query 183237 GTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAA 183278 ||| ||||| ||||| ||||| | || ||||| ||||| Sbjct 1180 CTGGGGTGAAAGGCCTATTTTTGGCTATATCAGATACATGAA 1221 >seq15988 Length=1264 Score = 96.9 bits (106), Expect = 6e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 183058 GGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAA-G 183116 ||||||||| | | | |||||||||||||||||| |||||| | || || ||| ||| | Sbjct 264 GGAAAAATGGCTGGGTATTTACGAATGTACTGGGCCAAAAAGTTTCTGGAGTGGTCAAAG 205 Query 183117 AACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGG 183176 ||| || ||| | || | | || || | || ||||| |||| ||| | ||||| Sbjct 204 AAC-CCTGAACAAGCCTATCGGAATTGTCTTTACCTGAACGATAAATACAGTTTGGACGG 146 Query 183177 TACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGC 183236 || ||||||||| |||||| ||||||||||| || | || | || || | | Sbjct 145 TAACACCCCTAACGGAATCGTAGGCTGTATGTGGTCCATGTATGGGCTGCATGACCGTCC 86 Query 183237 GTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAA 183278 ||| ||||| ||||| || || | || ||||| ||||| Sbjct 85 CTGGGGTGAAAGGCCTATTTTCGGCTATATCAGATACATGAA 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902610393727040