Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq43997 96.9 3e-15 seq43996 95.1 1e-14 >seq43997 Length=5328 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || |||||||| ||||||||||||| || || ||||||||||||||||| Sbjct 5098 GTTGATTCTTTCTGAATATTGTAATCGCTCAAAGTTCTTCCATCCTCGAGCTGCTTGCCA 5157 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| ||||| || ||||| || || ||||| || |||||| || Sbjct 5158 GCAAAGATAAGCCTTTGCTGATCAGGAGGAATACCCTCCTTATCCTGAATCTTTGATTTA 5217 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | ||| || || | || | ||||| || || |||||| Sbjct 5218 ACGTTTTCAATTGTGTCAGATGACTCAACATCAAGAGTTATAGTTTTCCCAGTAAGAGTT 5277 Query 133644 TTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 5278 TTAACAAATATCTGCATG 5295 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||| || || |||||||| ||||| | || || ||||||||| Sbjct 4861 AAATGCAGGGTGGATTCCTTTTGTATATTATAATCACTCAAGGTTCTTCCATCCTCGAGC 4920 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||||||||| | || |||| ||||| || ||||| ||||| ||||| || ||| Sbjct 4921 TGCTTGCCCGCAAAGATAAGCCTTTGCTGATCAGGAGGAATGCCCTCCTTATCCTGAATC 4980 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| || | | || | ||||| | | || || || | || | ||||| || Sbjct 4981 TTTGATTTAACGTTTTCGATTGTGTCAGATGATTCAACATCAAGAGTTATAGTTTTTCCA 5040 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| || ||||| ||||| Sbjct 5041 GTAAGAGTTTTAACAAAAATTTGCAT 5066 >seq43996 Length=5100 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||| || || |||||||| ||||| | || || ||||||||| Sbjct 4861 AAATGCAGGGTGGATTCCTTTTGTATATTATAATCACTCAAGGTTCTTCCATCCTCGAGC 4920 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||||||||| | || |||| ||||| || ||||| ||||| ||||| || ||| Sbjct 4921 TGCTTGCCCGCAAAGATAAGCCTTTGCTGATCAGGAGGAATGCCCTCCTTATCCTGAATC 4980 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| || | | || | ||||| | | || || || | || | ||||| || Sbjct 4981 TTTGATTTAACGTTTTCGATTGTGTCAGATGATTCAACATCAAGAGTTATAGTTTTTCCA 5040 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || |||||||| || || ||||||||| Sbjct 5041 GTAAGAGTTTTAACAAATATCTGCATG 5067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482992283717360