Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq43997 125 7e-24 seq33280 125 7e-24 seq43996 116 4e-21 >seq43997 Length=5328 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | |||| || | || || |||||||||||||| || || || || | | Sbjct 4840 CCACCTCTTAAACGCAGAACCAAATGCAGGGTGGATTCCTTTTGTATATTATAATCACTC 4899 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || |||||||| ||||| ||||| || | | |||||||| || || Sbjct 4900 AAGGTTCTTCCA-TCCTCGAGCTGCTTGCCCGCAAAGATAAGCCTTTGCTGATCAGGAGG 4958 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || ||||| ||| ||| || || | |||||| || ||||| || Sbjct 4959 AATGCCCTCCTTATCCTGAATCTTTGATTTAACGTTTTCGATTGTGTCAGATGATTCAAC 5018 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||| || || | ||||||||| ||||||||||| Sbjct 5019 ATCAAGAGTTATAGTTTTTCCAGTAAGAGTTTTAACAAAAATTTGCAT 5066 >seq33280 Length=5083 Score = 125 bits (138), Expect = 7e-24 Identities = 123/156 (79%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || |||||||| || || ||||| | | ||||||||| || || || || || || Sbjct 23 TCCTCAAGCTGTTTTCCAGCGAAAATAAGTCTCTGCTGATCAGGAGGAATTCCCTCCTTG 82 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGTAAT 134677 || ||||||||| ||| || | | ||||| |||| || ||||| ||||| ||||| || Sbjct 83 TCCTGAATTTTTGTTTTCAC-GTTTTCAATGGTGTCAGATGATTCAACGTCAAGAGTGAT 141 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| |||||||| |||||||| ||||||||||| Sbjct 142 GGTTTTTCCGGTTAACGTTTTAACAAAAATTTGCAT 177 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | ||| | || || ||||| || || ||||||||||| || ||||||| Sbjct 179 CCACCTCTCAATCGAAGAACAAGATGTAGAGTAGACTCCTTTTGAATATTATAGTCGCTT 238 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || | || || || |||||||| | | |||||| || || || Sbjct 239 AAGGTCCTCCCATCTTCTAATTGCTTACCAGCAAAAATAAGTCTCTGCTGGTCTGGAGGA 298 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGAC-GAT-TCCA 134664 || ||||| || ||||||||||| ||| || || | ||||| || | | || | Sbjct 299 ATACCTTCCTTGTCTTGAATTTTAGATTTAACATTCTCAATCGTGTC--ACTGCTCTCAA 356 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || |||||||| || ||||| || ||||| || || || ||||||||| Sbjct 357 CATCAAGAGTAATAGTCTTACCAGTCAAAGTCTTCACAAATATTTGCATT 406 >seq43996 Length=5100 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | |||| || | || || |||||||||||||| || || || || | | Sbjct 4840 CCACCTCTTAAACGCAGAACCAAATGCAGGGTGGATTCCTTTTGTATATTATAATCACTC 4899 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || |||||||| ||||| ||||| || | | |||||||| || || Sbjct 4900 AAGGTTCTTCCA-TCCTCGAGCTGCTTGCCCGCAAAGATAAGCCTTTGCTGATCAGGAGG 4958 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || ||||| ||| ||| || || | |||||| || ||||| || Sbjct 4959 AATGCCCTCCTTATCCTGAATCTTTGATTTAACGTTTTCGATTGTGTCAGATGATTCAAC 5018 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||| || || | ||||||||| || || ||||| Sbjct 5019 ATCAAGAGTTATAGTTTTTCCAGTAAGAGTTTTAACAAATATCTGCAT 5066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504950402223280