Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq61479 107 2e-18 >seq61479 Length=12598 Score = 107 bits (118), Expect = 2e-18 Identities = 139/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 |||||||| |||||||| ||||||| || ||||| |||||||| | |||||||| Sbjct 3798 GAAGTTCAGGCGACAGAAGCAAGATGTTTCTACGGGTTCCAAATTGCGGTGGAAAATATC 3857 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGA--GAAGC 44033 || || |||||||||||| | |||| ||||||||||| ||||| | || ||| Sbjct 3858 CACTCTGAAATGTACAGTTTGTTGATTGATACGTACATTAAAGAAATCGAAGAACGAA-- 3915 Query 44034 ATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCC 44093 || | ||||| || || || ||||| | ||| | | || | || || || ||||||| Sbjct 3916 ATAGGTTGTTCAAAGCCATCGAAACCCTTCCTTCTGTCAAGAAAAAGGCTGAATGGGCCC 3975 Query 44094 TTAAATGGAT 44103 | || ||||| Sbjct 3976 TAAACTGGAT 3985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397112492938570