Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq61479 84.2 3e-11 seq8514 84.2 3e-11 >seq61479 Length=12598 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 122380 ACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 122439 || ||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||| Sbjct 7104 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTCAAGAGAGATGTTTTCCATAAAATCAAAA 7045 Query 122440 GGATTCTTCGCGTTCCAAATGGGTGGC--ACCCCAACTTGTTTGAGGAGACGATCCGACA 122497 || || || |||||||| | || ||||| || | | | ||| | ||| | | Sbjct 7044 GGGTT-AACG-GTTCCAAAGATTTTGCTGTACCCAAGTTCTATCATGAGCCTATCAGCAA 6987 Query 122498 CATACTCAATGTACTCGGACATCTTC-TCAGAGTTCATACCGATGAGGTTACATGGGAGT 122556 || | |||||||| || |||| | | ||| | ||||| || || || ||| || || Sbjct 6986 CAAATTCAATGTAATCACACATATCCTTCACA-TTCATTCCAATAAGTTTAACAGGAAGA 6928 Query 122557 GCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTT 122597 || || || || | || |||| |||||||| ||||| Sbjct 6927 GCTTCACTGAAAAATTCCTTTTCAACATCAACCGCATCTTT 6887 >seq8514 Length=8580 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 122380 ACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 122439 || ||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||| Sbjct 5711 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTCAAGAGAGATGTTTTCCATAAAATCAAAA 5770 Query 122440 GGATTCTTCGCGTTCCAAATGGGTGGC--ACCCCAACTTGTTTGAGGAGACGATCCGACA 122497 || || || |||||||| | || ||||| || | | | ||| | ||| | | Sbjct 5771 GGGTT-AACG-GTTCCAAAGATTTTGCTGTACCCAAGTTCTATCATGAGCCTATCAGCAA 5828 Query 122498 CATACTCAATGTACTCGGACATCTTC-TCAGAGTTCATACCGATGAGGTTACATGGGAGT 122556 || | |||||||| || |||| | | ||| | ||||| || || || ||| || || Sbjct 5829 CAAATTCAATGTAATCACACATATCCTTCACA-TTCATTCCAATAAGTTTAACAGGAAGA 5887 Query 122557 GCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTT 122597 || || || || | || |||| |||||||| ||||| Sbjct 5888 GCTTCACTGAAAAATTCCTTTTCAACATCAACCGCATCTTT 5928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627475296734400