Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq61479 91.5 1e-13 >seq61479 Length=12598 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786 |||||| |||| ||||| | ||| |||||||| || | |||| || | || || || Sbjct 3986 AATCCAGTTTAGGGCCCATTCAGCCTTTTTCTTGACAGAAGGAAGGGTTTCGATGGCTTT 3927 Query 4787 AAATAATTTACTT---TTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 || || || || | ||| | | |||| ||| || || || || | | || || Sbjct 3926 GAACAACCTATTTCGTTCTTCGATT---TCTTTAATGTACGTATCAATCAACAAACTGTA 3870 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 ||||||||| || |||||||| | ||||| || || ||||| || ||||| |||||||| Sbjct 3869 CATTTCAGAGTGGATATTTTCCACCGCAATTTGGAACCCGTAGAAACATCTTGCTTCTGT 3810 Query 4904 TACTTGAACTTCGTT 4918 | |||||||| || Sbjct 3809 CGCCTGAACTTCATT 3795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426680516244362