Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeromyxa_20zaharoni_20[genbank_20GCA_5F001455285.1_202015-12-02] 70,914 sequences; 173,585,031 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq43997 86.0 6e-12 seq43996 86.0 6e-12 >seq43997 Length=5328 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||| | ||| || |||||||||||||||||| | || | | || || Sbjct 4630 ACCAAATGTAAAGTGGATTCTTTCTGAATGTTATAGTCGCTTAATGTTCTTCCATCCTCC 4689 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | || || ||||||||||||| | |||||| |||| |||| | |||||| ||| || Sbjct 4690 AATTGTTTCCCGGCGAATATCAATCTCTGTTGATCCGGAGGAATACCCTCCTTATCC-TG 4748 Query 41774 ATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | |||| | || |||| | | || || ||||| || |||| ||||| ||||| Sbjct 4749 AATTTTCGTTTTAACGTTCTCAATCGTATCAGAAGACTCAACGTCCAGGGTTATTGTTTT 4808 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || || ||||||||| Sbjct 4809 CCCAGTGAGGGTTTTCACAAATATCTGCATG 4839 >seq43996 Length=5100 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||| | ||| || |||||||||||||||||| | || | | || || Sbjct 4630 ACCAAATGTAAAGTGGATTCTTTCTGAATGTTATAGTCGCTTAATGTTCTTCCATCCTCC 4689 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | || || ||||||||||||| | |||||| |||| |||| | |||||| ||| || Sbjct 4690 AATTGTTTCCCGGCGAATATCAATCTCTGTTGATCCGGAGGAATACCCTCCTTATCC-TG 4748 Query 41774 ATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | |||| | || |||| | | || || ||||| || |||| ||||| ||||| Sbjct 4749 AATTTTCGTTTTAACGTTCTCAATCGTATCAGAAGACTCAACGTCCAGGGTTATTGTTTT 4808 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || || ||||||||| Sbjct 4809 CCCAGTGAGGGTTTTCACAAATATCTGCATG 4839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461894202176800