Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq27488 80.6 8e-11 >seq27488 Length=630907 Score = 80.6 bits (88), Expect = 8e-11 Identities = 70/87 (80%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 7061 GACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAGTCAGCACCGCTGATGCTGCT 7120 |||| | || ||||||||||| || ||| |||||||||| || | |||||||||||||| Sbjct 364670 GACCCCGGGGGATCCGGCGCGCGAATTCCCCATGATTCACTCCACTCCGCTGATGCTGCT 364611 Query 7121 GGCTGACCCTGATGAGTTCGTGTCCGT 7147 | | ||||||| | ||||| ||||| Sbjct 364610 GCCACACCCTGACGCATTCGTCTCCGT 364584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155026057464096