Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq29598 105 8e-18 >seq29598 Length=358761 Score = 105 bits (116), Expect = 8e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 53732 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTT 53791 ||||||| |||| | || | || ||||| || || |||||||| ||||||||||| Sbjct 199661 ACCTCATCAGCACTGGAGTACTCTACGATCTCTGTACACAGATTACTGCACTTGATGGTG 199720 Query 53792 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTA 53851 || || |||||||| |||||||| |||||||| ||||| || | ||| | || ||| Sbjct 199721 CCCAAGTTTTGTTGGTTACTCTTCTTGTTACAATGGTCCTTGTAGACCATGTAAGGGGTA 199780 Query 53852 CCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTAT 53904 ||||| || ||||||| || || || || | ||| | | ||||||| || Sbjct 199781 CCAGTCTCTGTCTGGGACTCGATGATGGCATACCACAGAGCCTGAGCCTTGAT 199833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593484875776560