Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq26965 87.8 2e-12 >seq26965 Length=571932 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 16310 CGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCG 16369 || || || | |||||| ||||| ||||| || || || ||||| || ||||| ||||| Sbjct 62585 CGCTTCTTGAACCAAAAAATAGCAGCAAAGGATCCTGAGAAGAAGATTCCTTCCACTGCA 62644 Query 16370 GCAAATGCAACCAATCGCTCACCGTACGTTCTATTTTTACTTTCTATCCATTTTTTAGCC 16429 |||||||||||||||| |||| || | || || | | | ||||||| || |||| Sbjct 62645 GCAAATGCAACCAATCTCTCAGCGAAGGTGCTCTCATCTGATGCTATCCACTTCAAAGCC 62704 Query 16430 CAATTTGCTTT 16440 || | |||||| Sbjct 62705 CAGTCTGCTTT 62715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462327590684200