Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq26121 89.7 5e-13 seq26067 82.4 7e-11 >seq26121 Length=543453 Score = 89.7 bits (98), Expect = 5e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 || |||||||| || || ||||||| ||| || || ||||||||||| || || |||||| Sbjct 55673 ATGACGCCCATCTTCTGGTATTCACCAACCCTCTTCTCAAAGAAGTTTGTCTTTCCTTCC 55732 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATT 13992 | ||| || |||||||| || |||||||| || Sbjct 55733 AATGAGATGTTTTCCATGAAGTCAAATGGGTT 55764 >seq26067 Length=6056 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 ||||||||||| || |||| ||||||||| ||||| ||||| || || || ||||| Sbjct 4351 ATGTATGTATCGATGAGTAGTGAATACATTTCTGAGTGGATGTTCTCGATGGCGATCTGG 4292 Query 14534 AAACCATAAAAACATCTAGCTTCTG 14558 |||||||| ||||| || ||||||| Sbjct 4291 AAACCATAGAAACACCTGGCTTCTG 4267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482153282779960