Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq26121 84.2 3e-11 >seq26121 Length=543453 Score = 84.2 bits (92), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 49639 TGATTATCTTCTTGAGA-CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAA 49697 |||| | || ||||| ||| || ||||| || ||||||||||| || | || || || Sbjct 55654 TGATGAGTTTGTTGAGCTCATGACGCCCATCTTCTGGTATTCACCAACCCTCTTCTCAAA 55713 Query 49698 AAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 || || || |||||||||||||| || ||||||||||| ||||| || || Sbjct 55714 GAAGTTTGTCTTTCCTTCCAATGAGATGTTTTCCATGAAGTCAAATGGGTT 55764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717982417251080