Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_005294.1 Length=42935 Score E Sequences producing significant alignments: (Bits) Value seq7108 257 5e-64 >seq7108 Length=290 Score = 257 bits (284), Expect = 5e-64 Identities = 197/232 (85%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 40628 CTGAACCAAGGCTGACACTGACAGGCAATACCCTCGGCATTGTCGGAGGTAATAATGTCA 40687 |||||||||||||||| |||||||||||| |||||||| | || || |||||||||| Sbjct 1 CTGAACCAAGGCTGACCAAGACAGGCAATACTCTCGGCATCGCTGGGGGGAATAATGTCA 60 Query 40688 CTCTACCGCTACCAGATAACGTAGGGCATGAAATCCGTGGTATAGGTTCGCCAGAAGGGC 40747 ||||||||||||| || |||||||| |||||||||||||||| |||||| |||||||| | Sbjct 61 CTCTACCGCTACCCGAAAACGTAGGCCATGAAATCCGTGGTACAGGTTCACCAGAAGGCC 120 Query 40748 GTATTGCTGCTGAAATCGGAACAACCTATGTAGA---TACCGCAGTTACCAACGGTGCTC 40804 |||| | || |||||||| || |||||| | || || ||| |||||||| |||| Sbjct 121 GTATAACGGCCGAAATCGGCACGACCTATATCGATGTTAACGC---GACCAACGGCGCTC 177 Query 40805 TTAAATGGATTAAAGAGAGTGGGAATGGTAACACTGGTTGGAAGGTTCTCAT 40856 | |||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 178 TGAAATGGATAAAAGAGAGTGGGAATGGTAACACTGGTTGGAAGGTTCTAAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137218405146858