Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq31764 86.0 3e-12 >seq31764 Length=359858 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||| |||||| ||| |||||| |||||||||||||||| ||||||||||||| ||| || Sbjct 93834 TGGTCCATGAGAGGCTCGAACTCTCGACCTTCGCGTTATCAGCACGACGCTCT-ACCGAC 93892 Query 11516 TGAGCTAATGGGCC 11529 |||||||| || || Sbjct 93893 TGAGCTAACGGACC 93906 Lambda K H 0.640 0.410 0.923 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261389546685172