Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_007458.1 Length=37253 Score E Sequences producing significant alignments: (Bits) Value seq21096 95.1 3e-15 >seq21096 Length=1089 Score = 95.1 bits (104), Expect = 3e-15 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 12049 AAAAGTTAAAAGAAGATTTAGCGGATTGGTTATATACAGAGCAACC-TGCTGAACTTATT 12107 |||| |||||||||| |||| |||||| | ||| || ||||| ||| || |||||| Sbjct 325 AAAAACTAAAAGAAGAAATAGCAGATTGGCTCGTTACGGATCAACCGTGC-GAGCTTATT 383 Query 12108 TTTGATGATGAGTTAGACAGGACTTATTTATCATTAATTGATGGTTCTGTCGATTTGGAC 12167 ||||||||||| ||| | || | |||| | | | |||| || | ||||| || Sbjct 384 TTTGATGATGAAAAAGATCGTACGTTTTTAGCTGTCGTAGATGAAACTTTAGATTTAGAG 443 Query 12168 GAAATAGTCAATAGAGGTAAAGGTGTTATTACTTTTGTTTGTCCAATGCCGTATAAATTA 12227 | |||| || |||| ||||| | | ||||| ||||||||||||| ||||| ||| Sbjct 444 CAGTTAGTTGATCTAGGTGAAGGTACTTTAACTTTCATTTGTCCAATGCCATATAAGTTA 503 Query 12228 GGGAAA 12233 || ||| Sbjct 504 GGAAAA 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119042892219510