Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq29598 93.3 7e-14 >seq29598 Length=358761 Score = 93.3 bits (102), Expect = 7e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 204188 TTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGT 204247 |||| | ||| || ||||| |||||||| | || ||| | | ||| | ||| | || Sbjct 197317 TTGACCACCTGGAACTCTCCTGACAGCACACGGCGCGTGTAGATGTTACTCGTGTAAGGC 197376 Query 204248 TCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGG 204307 |||| ||||| ||||| || | |||||||||||| || || ||||||||||| ||| Sbjct 197377 TCGATGGCCTCATTGTTACCCAGGATCTGAGCGGTGGATGCGGTCGGCATGGGAGCAAGG 197436 Query 204308 AGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGC 204367 || || ||| || || |||| || || | ||| || || | ||||||||| Sbjct 197437 AGGAGACTGTTTCGGACGCCGTGCTTGGCGATGTCGGCCTTGAGGGATGCCCAGTCGTGG 197496 Query 204368 ATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGAT 204408 | | | || |||| ||||||||||| ||||| ||| Sbjct 197497 AGGTCGGTAGGGGTCACACCCCACATGTCTTGCTGAAGGAT 197537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794838161682320