Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq29598 95.1 1e-14 >seq29598 Length=358761 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||||| || |||||||||| || | ||| || || ||||| || | |||||| Sbjct 199678 GTACTCTACGATCTCTGTACACAGATTACTGCACTTGATGGTGCCCAAGTTTTGTTGGTT 199737 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 |||||| ||||| || |||||||||| |||||| || || || ||||| ||||| || Sbjct 199738 ACTCTTCTTGTTACAATGGTCCTTGTAGACCATGTAAGGGGTACCAGTCTCTGTCTGGGA 199797 Query 106627 CTTGAGAATTGCCTTCCACA 106646 || || || || | ||||| Sbjct 199798 CTCGATGATGGCATACCACA 199817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589745567280280