Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq30787 89.7 6e-13 >seq30787 Length=763470 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 153907 CACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAG 153966 |||| ||||| || || ||||| |||||||| || || ||||| || |||||||||||| Sbjct 205624 CACTCCAGACCAGGGAACAGCACATCAGGAGGGAGAAGGCAACAAGCAACATCTGCACAT 205683 Query 153967 CTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGAC 154026 ||||||| || || ||||| |||| | | ||||| | |||||||| | | |||| Sbjct 205684 CTCAGGCTCTCCTCGCTAACCTGTCAGCCATGTATGCCGTCTATCATGGGCCTAAGGGAC 205743 Query 154027 TACATGCTATAGCAAGAAGAAT 154048 | || || ||||| || || Sbjct 205744 TGCACCACATCGCAAGGAGGAT 205765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578981860616480