Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_019912.1 Length=36932 Score E Sequences producing significant alignments: (Bits) Value seq21096 210 5e-50 >seq21096 Length=1089 Score = 210 bits (232), Expect = 5e-50 Identities = 226/298 (76%), Gaps = 1/298 (0%) Strand=Plus/Plus Query 36221 AATTAGCATTCTTTAGTTTTAACGGAAAAAGAAATGACAAGGTGATTCCATTACAGGGCG 36280 ||||||| ||||||||||||||||| ||||| ||| || || |||||| | ||||| Sbjct 122 AATTAGC-TTCTTTAGTTTTAACGGGAAAAGGAATCCAAATGTAATTCCACTGCAGGGTA 180 Query 36281 TTAAACGTCCTGCATGGGCTCCTATTGAAAGAACGTTCTTAGAAGTACCGCACTATCCTG 36340 || || ||||||||||||||| | || | ||| | ||||| |||| ||||| | Sbjct 181 AAAAGCGCCCTGCATGGGCTCCTTTGGATCATATGTTTCTTGAAGTCTCGCATTATCCAG 240 Query 36341 GCGGTCGTTTATTGCGTACAGAAACGAAAATGAGAGAAATTTTAATACCTGTAGCATTTA 36400 | ||| | ||| | || ||| |||| ||||||||| | |||||| | ||| | ||| | Sbjct 241 GAGGTAGGTTACTACGCACACAAACTAAAATGAGAAAGATTTTAGTTCCTATTGCACTAT 300 Query 36401 TCTATGAAACATCGGAACAAGGTGAAAAATTAAAAGAAGAATTGGCCGATTGGCTTTATA 36460 | ||||| || | ||| ||| ||||||| ||||||||||| | || |||||||| || Sbjct 301 TATATGACTCAGCTGAAGAAGCTGAAAAACTAAAAGAAGAAATAGCAGATTGGCTCGTTA 360 Query 36461 CAGATCAACCAGCGGAATTAATTTTTGATGACGAAAAAGATCGTACTTATTTAGCTGT 36518 | |||||||| || | ||||||||||| |||||||||||||| | ||||||||| Sbjct 361 CGGATCAACCGTGCGAGCTTATTTTTGATGATGAAAAAGATCGTACGTTTTTAGCTGT 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118016081299116